KEGG   Fragaria vesca (woodland strawberry): 101307891
Entry
101307891         CDS       T02666                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03420  Nucleotide excision repair
fve03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101307891
   03460 Fanconi anemia pathway
    101307891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fve03032]
    101307891
   03400 DNA repair and recombination proteins [BR:fve03400]
    101307891
DNA replication proteins [BR:fve03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    101307891
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101307891
SSDB
Motif
Pfam: ERCC4 CARD
Other DBs
NCBI-GeneID: 101307891
NCBI-ProteinID: XP_011465214
LinkDB
Position
LG5:22758365..22763174
AA seq 1033 aa
MVQFHEHIIADLLENPPNGSGLVILSSGLSLPKLIASLLLLHTPSQGTLLVLSSSSSFKS
QLLHHFHPNPISEITADLPAPHRASLYSSGRPFFIXPRILIVDLLTSRLPSSLIAGLLLP
AAHSLSETSTEAFIVRIFRSLNTTAFVRAFSDKPHAMVSGFAKAERTLKCLFLRKLHLWP
RFHVGVSAELESHAPEVVDIRVPMTKHMLGIQKAIIEVMDACLKEMRKTNKVDVEDLTVE
NGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRV
SESFRSVWIFAESSYKIFEYAKKRVYRFVTSSGVNVSEQSKSSKGKKRKLKGDDDKEQDV
GGTSTTSVVLDEVLEEAPKWKVLREVLEEIEEERQKHASSREDHLVEDNVEGSDIILVAC
KDERSCMQLEDLINNGPQKVMREEWENYLLGKGELRDLHTRFKKKPKKAKGFGILDGVVH
TTAPQSTEASSINKQEHDALLAAASAINNRAKKEDAIGDDPQRIVSGRGHGKGKGKEVPA
KSPLNAEASGVDKQEPASGSEVRNQTRKDTVVGDDPQLLVGKGRGKGKGKVQNRKGPASV
KSLRNKVGSDDKKEETIDTLVISDSENEGQADKIHQVVTADSNDDALQGDPVGEGFLRKH
TEQLHSTALKIAKPLPPVHFYALESGQPILDILRPSTIVVYHPDMTFVREIEVYKAENPS
KKLKVYFLFYEDSSEGQKFEASIRRENGAFESLIRQKSLMMIPVDQDGNCMGSSSSLEPE
VSSQNSITRKAGGRREVEKQMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPL
ICVERKSIQDLFMSFTSGRLYNQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTP
NSIISKLSLLVLHFPRLRIIWSRSLHATAEIFATLKANQDEPDETKATRVGVPSEDGIIE
DDVRAENYNTSAVEFLRRLPGVTDSNYRSIMDGCKSLAELALMPVERLAELMGGHKAART
LREFLDAKYPTLL
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggtccaatttcacgagcacataatcgccgacctcctcgaaaacccacccaacggctcc
ggcctggtgatcctctcctccggcctctcccttcccaaactcatcgcctcccttctcctc
ctccacactccctcccaaggcaccctcctcgtcctctcctcctcctcctccttcaaatcc
caactcctccaccacttccaccccaaccccatctccgaaatcaccgccgacctccccgcc
ccccaccgcgcctccctctactcctccggccgccccttcttcatcnacccccgcatcctc
atcgtcgatctcctcacctcccgcctcccctcctccctcatcgccggcctcctcctcccc
gccgcccactccctctccgaaacctccaccgaggccttcatcgtccgcatcttccgctcc
ctcaacaccaccgccttcgtccgcgccttctccgacaagccccacgccatggtctccggc
ttcgccaaggccgagcggaccttgaagtgcctcttcctcaggaagctccatctctggccg
aggttccacgtgggagtctccgccgagctggagagccacgcgccggaggtggtggatatt
agggttccgatgacgaagcacatgctggggatccagaaggctattattgaggtcatggat
gcttgcttgaaggagatgaggaagacgaacaaagtcgatgtggaggatctgacggtggag
aatgggctgtttaagtcgtttgatgagattgttaggcggcagttggatcccatttggcat
acattggggaagaagaccaagcagcttgtttcggatttgaagactcttcggaagctcttg
gattaccttgttagatacgatgcggtgacttatttgaagtacttggatacactgagagtg
tcagagagtttccggtccgtctggatatttgcagagtcgagttataagatatttgagtat
gcaaagaaaagggtttatcgttttgtgacatccagtggggtgaatgtgagtgagcagagt
aagagttcgaaaggcaagaagaggaaactgaagggggatgatgataaagagcaagatgtt
ggtggcacttcaacgaccagtgtagttctggatgaagttttagaggaggcaccaaagtgg
aaggtcttacgtgaggttctagaagaaatagaagaagaaagacaaaaacatgcttcatca
agagaagatcatctggttgaagataatgtagaaggtagtgacattattctagtggcatgt
aaagatgaacgatcatgcatgcagcttgaggatctcatcaataatggtccacaaaaggta
atgcgggaagaatgggaaaattacttgttgggcaagggagaactgcgtgacttgcataca
cgttttaaaaagaaaccaaagaaagccaaaggttttgggattcttgatggagttgttcat
acgactgccccccagagtacagaagctagcagcataaacaagcaggaacatgatgctctt
ttggctgcagcatctgcgattaataatcgagctaaaaaagaagatgctattggagatgat
ccccagcgtattgtcagtggccgaggacatggaaagggaaagggaaaagaggttccagcg
aagtctccactgaatgcagaagctagcggtgtagacaagcaggaacctgcctctggatca
gaagttagaaatcaaactagaaaagatactgttgttggagatgatcctcaacttcttgtt
gggaaagggcgtggaaagggaaaaggaaaagtacagaacagaaaaggcccagctagtgtt
aagtctttgaggaataaagttggaagtgatgataaaaaggaagaaacaattgatacacta
gttatttctgattcagaaaatgaaggtcaagcagataaaattcatcaggtggtgacagct
gattccaatgatgatgcgttacagggtgaccctgtaggtgaagggtttttgaggaagcat
actgaacagcttcattctaccgcattgaaaattgctaagccactacctccagtgcacttt
tatgctcttgaaagtggtcaacctatacttgacattttgagaccctctactattgttgtt
taccacccagatatgacttttgtcagggaaattgaagtctataaagctgagaatccctca
aagaagttgaaagtatattttcttttctatgaagattcttctgagggtcaaaagtttgag
gcaagcattagaagggaaaatggagcctttgaatctttgattaggcagaagtcactgatg
atgataccagttgatcaggatggaaactgcatgggatcaagttcttctctagaacctgag
gtgtcatcccaaaactccataactagaaaagcggggggaagacgggaggttgagaaacaa
atgcaggtcatagtggacatgagggagttcatgagcagccttccaaatgttctccaccag
aagggcatgcgcataatacctgtgaccttggaagttggagattatatcctttctccatta
atatgtgtggagagaaagagtattcaagatctttttatgagcttcacatcaggccgtctt
tataaccaagtagaaactatggtgcggtactatagaatacctgtcctcctgattgaattt
tcacaagacaaaagcttctcatttcagtctgcaagtgatattggggatgatgtcacacca
aatagtattatttctaagctgtcgttgcttgttctacatttccctcgtctacgaatcatc
tggtctcgcagtctgcatgctactgctgaaatctttgctactctcaaggcaaatcaggat
gaacctgacgagacaaaagcaactagagttggtgtaccctctgaagatgggatcatagaa
gatgacgtgagggctgaaaattacaatacatctgccgtggagttcttgagacgactccca
ggtgtgacagattcgaattacaggtcaataatggatggttgcaagagtttggcagaactt
gctctgatgccagtggagaggctagccgaattaatgggtggtcataaagcagctcggacg
ttgagagagttccttgatgccaagtatccaaccctgttataa

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