Fragaria vesca (woodland strawberry): 101307930
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Entry
101307930 CDS
T02666
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101307930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101307930
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101307930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
101307930
NCBI-ProteinID:
XP_004288695
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Position
LG1:complement(466552..473543)
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AA seq
1072 aa
AA seq
DB search
MQRQKSILSFFRKPSPEKSSTAAADDGRRADHFAAKQQEQKAVGSNQAPDLKVRGTDTPP
EKVPRQILTANSASLRDSSPFSSIMHKFMKVDDSHKASQSHRNEPTGGSGNDCVVSGKFN
DANSGEKLKKGSVMLIESDDDIAGPETPGTQRLVPRMKRIQEEIPKFGDIFGSSVPNSSK
RLKVLEEPIVLDKSRGEASEMASKFEWLDPSRIRDANRRRPGDPLYDRTSLYIPPDALKK
MSASQRQYWDVKCQYMDVVIFFKVGKFYELYEIDAEIGHKELDWKMTLSGVGKCRQVGIS
ESGIDDAVQKLVVRGYKVGRIEQLETSEQAKARGAKAVIPRKLVQVVTPSTTTDGNIGPD
AVHLLAIKEGNSGVDNGSVVYGFAFVDCSALKFWIGAISDDASCAALGALLMQVSPKEVI
YENRGLSKEAQKALKKYSTGSALQLTPVQPVNDFVDASEVSKLIQLKGYFKGSSNSWNHG
LDGVHHDITLPALGTLIDHLSRLMLDDVLRNGDILPYQVYSGCLKMDGQTLINLEIFSNT
ADGGPSGTLYAFLDNCVTASGKRLLRKWICHPLKSVEAINNRLNVVEDLLGHPEMVPLIA
QYLRKLPDLERLFGRVRASVQSSASLLLPLFGKKVLKQRVKVFGTLVKGLRFGLDLLKVL
QNEGHMIELLLKLFKVPSLSGSDGLDLYLKQFEAAVDSDFPNYQDHGATDSDAETLSILV
ELFMEKATEWTDVIHGINCIDVLRSFAVTSSFPGGAMSRPVLLPQSQTTLNGENGCPTLN
IKGLWHPFALGENGGLPVPNDVVLGENTDGYHPRTLLLTGPNMGGKSTLLRSTCLAVILA
QLGCYVPCEICVLSLVDIIFTRLGATDRIMTGESTFFVECTETASVLQHATPDSLVILDE
LGRGTSTFDGYAIAYAVFRHLVEKINCRLLFATHYHPLTREFASHPHVSLQHMACAFRSK
SVSPLKRDQELVFLYRLTSGACPESYGLQVAMMAGIPEKVVEAASKAGQVMKKSVGESFK
SSEQRSEFSTLHEEWLKTLLTVSQAGNYNDEDSLDVLFCLQQELKCSYRSAN
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatcaatcctctcctttttccggaaaccctcgccggagaagagcagc
accgccgccgcagacgatggccggcgagctgaccatttcgcggcgaagcagcaggagcag
aaggccgtaggatccaatcaggctccggatctcaaagtccgaggaaccgacacgccgccg
gagaaggtgccacgtcagattctgacggcgaattctgcgagcctgagagactcttcgcct
ttctctagtattatgcataagtttatgaaggtcgatgactcacataaggcttctcagagc
caccggaatgaaccaactggtggttccggtaatgattgtgtagtatctggtaaatttaat
gatgcgaattccggtgagaaacttaaaaaaggttctgtgatgcttatcgaaagtgatgat
gacattgctggaccagaaacaccggggacacagcgtctagtacctcgtatgaagcggatt
caagaggagatacctaagtttggggatatatttgggagttctgtgccaaattctagtaaa
agattgaaagttcttgaggagccgatagtcttagacaagagccgtggggaggcgtctgaa
atggctagcaagtttgagtggcttgatccgtcccgaattagagatgcgaatcgcagaagg
cctggtgatcctctctatgacagaacatcgctttatataccgcctgatgctttgaagaaa
atgtccgcatcacagagacaatactgggatgtcaagtgtcagtatatggatgttgtgatt
ttctttaaagtgggaaagttttatgagctatatgaaatagatgctgaaattggccacaag
gagcttgattggaaaatgaccttgagtggtgttgggaaatgccgccaggttggcatatct
gaaagtgggattgacgatgctgttcaaaaattggttgtccgtgggtataaagttggacgg
atagagcagctggaaacttctgagcaagcaaaagccagaggtgccaaagctgtaattcca
agaaaattggttcaggttgtcacaccatcaaccacaactgatggaaatattggacctgat
gctgttcatcttcttgcaataaaagaggggaactctggggttgataatggttcagttgta
tatgggtttgcttttgttgattgttctgctttaaagttctggattggtgctatcagtgat
gatgcttcctgtgctgctttgggggctctattgatgcaagtgtcacctaaagaagttata
tatgagaatagagggctgtcaaaagaagctcaaaaggcactcaaaaagtactcaacaggt
tctgcactgcaattgactccagtgcagccggtcaatgattttgtggatgcttctgaagtt
agtaaactgattcagttgaaaggatacttcaaagggtcttctaattcatggaatcatgga
cttgatggtgtacaccatgacatcactttacctgctcttggtacacttattgaccatcta
tccaggttgatgttagatgatgttctacgcaatggagatatattaccttaccaagtttat
agtggttgcctcaaaatggatggacagacactgataaatcttgagattttcagtaatact
gctgatggtggtccatcaggtacgctgtatgcatttctcgataactgtgtgacagcatct
ggtaagcggcttctgaggaagtggatctgccatcccttgaaatctgttgaagccattaat
aaccggcttaatgtggttgaagatctactgggtcatccagaaatggtaccacttattgct
cagtatctccgcaagcttccagacttagagaggttgtttggacgggtcagggcaagtgtc
cagtcgtcagcttccctcctattgccattatttggcaagaaagtactaaaacagagagtg
aaagtgttcgggactcttgtgaaaggcctcagatttggactggatttgttaaaggtgtta
caaaatgaagggcatatgattgagctattattaaaactatttaaagttccaagtctaagt
ggcagtgatgggcttgatctatatcttaagcaatttgaagcagctgtagatagtgatttc
ccaaattaccaggatcatggtgcaactgattcagatgccgaaacactctcaattctagtc
gagctatttatggagaaagcaactgagtggactgatgtcatacatggcatcaactgtatt
gatgtactgagatcttttgcagttacttcaagtttcccaggtggagccatgtccagacct
gttcttttgcctcaatctcaaacaaccttgaatggagaaaatggatgtcctacactcaat
attaaagggctgtggcatccatttgctcttggtgaaaatggtggactgcctgtaccaaat
gacgtagttctaggtgaaaatactgatggatatcatccacgcactttactattaactgga
ccgaacatgggtgggaaatcaactcttcttcgttccacatgtctggctgtaatacttgcc
cagctgggctgttacgtgccctgtgagatatgtgttctctcacttgtggacatcatcttt
acacggcttggtgccactgatcgtatcatgactggcgagagtaccttctttgtggaatgc
acagagacggcatcagttcttcagcatgcaactccagattctttggttattcttgatgaa
ttgggtcgtggaacaagcacttttgatggatatgccattgcatatgctgtatttcgccat
cttgttgaaaagattaactgcagattgttattcgccacacactatcacccgcttacgaga
gaatttgcgtctcatccacacgtttcattacaacacatggcatgtgcatttaggtcaaaa
tctgtatcccctttaaaaagagaccaagagctggtatttctctatcgccttacctcaggg
gcatgcccagagagttatggattgcaagtagcaatgatggctgggatccctgagaaggtg
gttgaagctgcttcgaaggctggccaagtaatgaagaaatccgttggagaaagcttcaag
tctagtgaacagagatcagagttctcaactctccatgaggaatggctgaagacactgcta
acagtttcacaagccggtaactataacgacgaagattcattggatgtattgttttgcttg
cagcaagaactaaagtgctcatatagatcagctaactga
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