Fragaria vesca (woodland strawberry): 101307979
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Entry
101307979 CDS
T02666
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101307979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101307979
03012 Translation factors [BR:
fve03012
]
101307979
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101307979
Translation factors [BR:
fve03012
]
Eukaryotic type
Release factors
101307979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
101307979
NCBI-ProteinID:
XP_011462850
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Position
LG4:14720703..14723181
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AA seq
437 aa
AA seq
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MSDGQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHIEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWESLDINRYVLKHSSTGELIVKHLNKEQENNQSNFRD
PETNAELEVQEKISLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDEFSDDGEVYDDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatggtcaggagactgataagaacattgagatatggaagattaagaagctgatt
aaggctcttgaagctgcaaggggtaatggcaccagcatgatttctctcatcatgcctccc
cgcgatcagatatctcgtgttactaagatgctcggtgatgagtttggaactgcttcaaat
atcaagagtagggtgaatcgtcagtcagttctgggggcgattacatctgctcagcagaga
ctcaagctttacaacaaggttcctccaaatgggcttgttctatataccggaacaattgtt
accgacgatggtaaggaaaagaaggtgacaattgattttgagcctttcaggcctatcaat
gcgtctctttacctctgtgataacaagttccatattgaagctctgaatgaactcttggaa
tctgatgacaaatttggtttcattgtcatggatggtaatgggactctttttgggacacta
agtggcaacacaagagaggtgctgcataagtttagtgttgacctgccaaagaaacacgga
agaggaggacaatctgctcttcgttttgctcgtcttcgaatggagaagcgtcacaactat
gttaggaagactgcagagcttgccacacagttttatattaatcctgccaccagccagccc
aatgtttcaggattgatacttgctggatctgctgacttcaaaactgagctcagtcagtca
gatatgtttgatccccgcctgcaggccaaaatactcaatgtggtggatgtttcttatgga
ggagagaatggctttaatcaggctatcgagttgtctgcagaaatcctgtccaatgtgaag
ttcatacaggagaagaagttgatcggaaaatacttcgaggagatcagtcaggatactggg
aagtatgtttttggtgtagatgacacacttaaagctttggagatgggtgctgttgagata
ctaattgtgtgggaaagtcttgacatcaataggtatgtgctaaaacatagcagtactggc
gagttgattgtgaagcatttgaacaaggagcaggaaaacaatcagagcaacttccgggat
cctgagaccaatgctgagttggaggttcaggaaaagatctcattattggagtggtttgct
aatgagtaccggcggtttgggtgttctctggagtttgtgaccaacaaatcacaagagggg
tcacagttctgccgaggttttggagggattggaggaattctccgctaccagcttgacatg
aggtcttttgatgagttttctgatgatggtgaagtgtatgatgattctgaatag
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