Fragaria vesca (woodland strawberry): 101308180
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Entry
101308180 CDS
T02666
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04016
MAPK signaling pathway - plant
fve04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
101308180
04075 Plant hormone signal transduction
101308180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101308180
Transcription factors [BR:
fve03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101308180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
Bap31_Bap29_C
PUMA_CC
bHLH_INO4
DUF7050
bHLH_SAC51
Troponin
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
101308180
NCBI-ProteinID:
XP_004300239
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Position
LG5:21462407..21464863
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AA seq
682 aa
AA seq
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MTDYRIPPTMNLWTDDNASLMEAFMSNSDLTSFWAAQPAQPAAHPLHQPQSSASTSDYPR
PPAQAPAPVSAPFNQETLMQRLQALIEGARESWTYAIFWQSSYDMSGASVLGWGEGFYKD
ERDKVKTKPKTTTSLVEQEYRKKVLRDLNSLISGADTSADDAVVDQEVTDTEWFFLVSMT
QNFVNGGGLPGQAFFHSNPVWVAGPDRLAASSCERARQGQVFGLQTMVCVPTANGVVELG
STELIFQSSDLMNKVRVLFDFNNLEVGSWPMGGAADQGESDPSSLWINDNPSSTIEVVKE
SVNIAPATSGPSTSNHHISKNPIPFDNNHPSSSGLSDNPSAVLQVSHHQQQQPQQQVTQT
QSFFTRELNFSDYNGYDGSSVKNSNSNSHSMKPESGEILNFGESKRTSYSANNGKLFSAQ
SQIAAEDTNKKKRSPSSRGSEEGILSFTSGVILPSSSGVVKSSAGPADSDHSDLEASVAK
EADSSRVVDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMD
KASLLGDAISYITELKTKLQTTESDKEDMQKQVETLSKELQESRSCSGLDQELKGSTKLI
DLDIDVKILGWDARIQIQCSKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVRM
GSRIYTQEQLRLALSAKVGDAR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacggactaccggataccacccaccatgaatctctggacagacgacaacgcctctctc
atggaggccttcatgagcaactccgatctcacctccttctgggccgcccagccggcccag
cccgccgcccacccgctccaccagccccagtcttcggcttccacgtcggactacccccgc
cccccggcgcaggcgccggctccggtatcggcgccgttcaaccaggagacccttatgcag
cggctgcaggccttgatcgagggcgccagggagagctggacctacgccatcttctggcag
tcttcgtacgacatgtcgggcgcctccgtgctcggctggggcgaggggttctacaaggac
gagagggacaaagtaaaaacgaagcccaaaacgacgacgtctctggtcgagcaggagtac
aggaagaaagttctcagggacttgaactccttgatttccggcgcagacacctccgccgat
gacgccgtcgtcgatcaggaggtcactgacacagaatggttcttcctcgtttccatgacc
cagaatttcgtcaacggcggcgggctgccgggtcaggccttcttccactccaacccggtc
tgggtcgccgggccggaccgcctcgctgcctcttcttgcgagcgggcccgccaaggtcag
gtgttcgggcttcagaccatggtctgcgtcccgacggcgaacggcgtcgtcgagttgggc
tcgacggagctcatattccaaagctcggatctgatgaacaaggtccgtgttttatttgac
ttcaacaatcttgaagtcggttcttggcctatgggcggcgccgccgatcagggcgagagc
gacccgtcgtcgctctggatcaacgacaacccgtccagcacaatcgaagttgtcaaagaa
tcagtcaacatagctccggcgacttcaggacccagtaccagtaaccatcacatctccaag
aatccgattccgttcgacaataaccaccctagctccagtggcttatcggacaatcccagc
gccgttctccaagtcagtcaccaccagcagcaacaaccccagcagcaagtcacgcagacg
cagagcttcttcacccgggagctcaatttctccgattacaatggttacgacggcagcagc
gtcaagaactcgaattccaattcacactccatgaagccggagtccggcgagatattgaac
ttcggtgagagcaagaggacatcttacagcgccaacaacgggaagttgttttctgctcag
tcccaaatcgccgccgaggacaccaacaagaagaaaagatcgccgtcgtcgaggggcagc
gaagaggggatcctgtcgtttacctcaggagtgattctaccgtcgagtagtggtgtcgtg
aaatctagcgccggcccggcggattccgaccactccgaccttgaagcgtccgtggctaag
gaggccgacagtagtagagttgtggaccccgaaaaacgaccccggaaaagaggtcgtaaa
ccggcgaacggcagagaggagccgctgaaccacgtggaggcagagaggcagagaagagag
aagctcaaccagagattctatgctctccgagctgttgttccaaatgtgtcgaaaatggac
aaggcgtctctgctcggggatgccatctcttacatcaccgagctcaagacgaagctgcaa
acgacggagtcagacaaggaggacatgcagaagcaagtagagacgttaagtaaagagcta
caagagtcccggtcgtgttcaggtttggaccaagagcttaaagggtctactaaattgatc
gatttggatatcgatgtcaagatactcggatgggacgccaggattcaaatccaatgtagc
aagaagaaccaccctgcggcgaggctaatggcggcgctgatggagctggacttggatgta
caccacgccagcgtttcggtagtcaatgatttgatgatccagcaagccacggtgaggatg
ggcagccggatttacacgcaggagcagctcagattagctctatcagccaaagtgggggat
gccagataa
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