Fragaria vesca (woodland strawberry): 101308499
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Entry
101308499 CDS
T02666
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101308499
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
101308499
NCBI-ProteinID:
XP_004306655
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Position
LG7:complement(3340770..3344897)
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AA seq
684 aa
AA seq
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MAHSQCDSSSVSRGGDTGYGSALYTELWKLCAGPLVDVPRIGERVFYFPQGHMEQLEAST
NQELNPQIPRFNIPSKILCQVVNIQLLPERDTDEVYAQITLLPEPDQSEPTSPDPCVPEP
PTPATYSFCKILTASDTSTHGGFSVLRKHANDCLPPLDMNQATPTQELAAKDLHGYEWKF
KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGGNGELGVGVRRLARQQTPMPSSV
ISSQSMHLGVLATASHAVMTSTLFVVYYKPRTSQFIVGLNKYLEAINNKFSVGMRFKMRF
EGEDSPERRFTGTIVGVGDLSPHWAESKWRSLKVQWDEHATVPRPDRVSPWEIEPFVASV
PLNLAQPVVKSKRPKTVEIASSEITTNSTASPFWYQGSNQSAEPTQLGCVAEVQSCGSQV
VWPPRQKDSNGSGYSSSRICAEGIWPSSPNVNVSLSLFADSQEGNKNATMGSMLPNFSSP
SSKTSNGPVHDQLETGKKFESSGFRLFGYDVPKAITANLREKEPMFTTVCSGAKGPILAA
ASELDQDPNISRISKEQMQLISEVPPIETQSKQGSTVSMRSRTKVHMEGVAVGRAVDLTA
LKGYDDLIDELEKMFEIKGELRPANKWAVVFTDDENDMMLLGDYQWQDFCRTVKKIFIFS
SDHVQMLRQGKLKSSALLCEENVN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacagtcagtgtgactcttcatctgtttctcgtggtggtgatacaggttatgga
agtgctttgtatacagagctatggaagttatgtgcagggcctcttgtggatgtgcccaga
attggagagagagtcttctactttcctcagggccatatggaacaactggaagcatcaaca
aatcaagaactgaatccgcaaatccctcggttcaatataccgtctaagatcctttgtcaa
gttgttaacattcaattactgccagaacgagacaccgatgaagtttatgctcagatcact
ttgctcccagaaccagatcaaagtgaacctacaagtcccgatccatgtgtaccggagcct
ccaacaccggctacttattccttttgcaagattttgacagcttctgatacaagcacccat
ggagggttctcagttcttcgaaagcatgctaatgattgcttacctcctttggatatgaac
caggcaactccaactcaggaattggctgccaaagatcttcatggctatgagtggaaattt
aagcatatcttcagaggtcaaccgcggaggcatttacttaccacaggatggagtacattt
gtcacatccaaaagattggttgctggtgatgcgtttgtgttcttgaggggtggtaatggg
gaactaggggttggggttcggcgtcttgctcgtcaacagactcccatgccttcatcagtg
atatctagccagagcatgcatctaggagtgcttgcaactgcttctcatgccgtcatgacc
tcaactctatttgttgtctattacaagcccaggacgagccaatttattgttggcttaaac
aaatatcttgaagccatcaacaataaattttctgttggcatgcgctttaaaatgcgattt
gagggggaagactcaccggaaagaagattcactggcactatagtaggggttggggattta
tctcctcactgggcagaatctaaatggcgatctctgaaggttcaatgggatgaacatgcc
acagtaccaaggccggatagggtttctccttgggaaatagagccatttgtagcttctgtt
ccgttaaatcttgctcaaccagtagtaaagagcaaaaggcctaaaaccgttgaaattgct
tcatcagaaattaccaccaattcaactgcttcacctttctggtatcaagggtcaaaccag
tctgctgagccaactcaattaggctgtgttgctgaagtccaaagctgtggtagccaggtt
gtctggcccccaaggcagaaagacagcaatggcagcggctactctagctcaaggatctgt
gcagagggtatctggccttcttctccaaatgtgaatgtttctttaagcctgtttgcagac
tcacaagaaggcaacaagaatgctactatggggtccatgctccctaacttctcctcccca
tcttcgaaaacaagcaatggcccggtgcatgaccagctggaaacagggaaaaagttcgag
tcttcaggttttcggttgtttggttatgatgtgccaaaggcaattactgccaatcttcgg
gagaaagagccaatgtttacaacagtttgctctggtgccaaaggaccgattctggctgct
gcatcagaacttgatcaggaccccaatatttcaagaatctcaaaagaacagatgcaactt
atatcagaggtaccaccaattgagacacaaagcaagcagggatccactgtttcaatgaga
tctcgtactaaggtgcatatggaaggggttgctgttggtcgtgctgtggacttgactgca
ttaaaggggtatgatgatttaattgacgagctagagaaaatgtttgagatcaaaggagag
cttcgtccagcaaacaaatgggcagttgtttttactgatgatgaaaatgacatgatgctt
cttggcgattatcaatggcaggacttttgccggactgtgaagaagatattcatcttttca
agtgatcacgtacagatgctaagacaaggcaagctaaaaagttcggcattactgtgtgag
gagaatgtcaactaa
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