Fragaria vesca (woodland strawberry): 101308712
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Entry
101308712 CDS
T02666
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101308712
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101308712
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GFIT
Motif
Pfam:
Glyco_hydro_28
Phage_Coat_A
Phage_DNA_bind
Motif
Other DBs
NCBI-GeneID:
101308712
NCBI-ProteinID:
XP_004288764
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Position
LG1:2406887..2408294
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AA seq
284 aa
AA seq
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MEGRVVAMIFLLMIILVASPSPSSCARLNGFPTTTTLRDDDSIGVYGDQVATVTSNSFNN
KKYGDVFATPYRFHEYRPLSSSQTSDDLQAFPEADGTSTFNVMNYGAIGNDQFDNTQVCL
SESMGIDVCGSTQDIPTLIIPKDNNFLLSSVEFKGPCKAASVNFQLNGNIVAPNDTNAWG
DNKGRWVQFDQVQGLIINEGGQIDGQGQALHFDSCDGLRLSNITHINSAKNHITITSCND
VQISDILIRAPDESPNTDGINISTSTNITIQRSFIGTGNWNQIS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgtgtagttgcaatgatatttttactcatgatcattctggttgcttcacct
tcaccaagttcatgtgcgagacttaatggtttccccacaacaactactttaagagatgat
gattccattggtgtttatggtgatcaagttgctactgtaacatcaaattcattcaataat
aagaaatatggtgatgtttttgcaacaccatatagattccatgagtatcgtcctctctca
agtagccaaaccagtgatgatttacaagcatttccggaagcagatggaacaagcacattc
aatgtgatgaattatggtgctattgggaatgaccaatttgataacacacaagtatgcctt
tctgaaagcatgggaattgatgtttgtggatccactcaagacatccctacccttatcata
ccaaaggataacaatttcctgctcagttctgttgagtttaaagggccttgcaaggctgca
agtgtcaattttcagctaaatgggaacattgtcgcgccaaatgatacgaatgcttgggga
gacaacaagggcagatgggttcagtttgatcaagttcaaggtctgataatcaatgaagga
ggtcaaattgatggtcaaggtcaggctctccattttgacagttgtgatggtcttcggttg
agtaatattacgcatattaatagtgcaaaaaaccatataaccatcaccagctgcaatgat
gtccaaatttctgatatccttatcagggctccagatgaaagtccaaacactgatggaatt
aacatctctacatcaaccaatatcaccattcaacgttcttttataggcaccggtaactgg
aaccagatttcctag
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