Fragaria vesca (woodland strawberry): 101308737
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Entry
101308737 CDS
T02666
Name
(RefSeq) uncharacterized LOC101308737
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101308737
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101308737
Surveillance factors
Other surveillance factors
101308737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
DUF6293_C
Motif
Other DBs
NCBI-GeneID:
101308737
NCBI-ProteinID:
XP_011457505
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Position
Un
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AA seq
1606 aa
AA seq
DB search
MADGKLDLPDDLLSSKPSDQSWSSKVEVSGGNVEEKVLMGSSDELKDPAAPDNSIPLSPQ
WLYAKPIESKLEMRGPTSLGNSTDSNQKEGWRLEGSEDKKDWRRPATESENSRRWREEER
ETSLLGGRRDRRKTERRADNIPLREATDSKALPTTDRWNDGRGDVRRDSKWSSRWGPDDK
EKEPRTEKRTDMEKDDAHSNNESQSLGANNRSAAERESDSRDKWRPRHRMEVHTGGSATY
RAAPGFGIERGRVEGSNLGFTLGRGRSSGVGRSTGTIGSALSGKSESVPGKPRLSSDGFC
YPRGKLLDVYRQRKPELSFDTMPDEMEESPPLTHVDFVEPLAFHAPDADEEAILSDIWKG
KITSSGVVYNSFRKGRSTEIITGVGDSEAADGVLGNLPSTVTQETSTFEEAANADDYGTS
WNYGSQRNAINEKDVGHKESDNRATEGKDLDGMSLSIPKSNGIYGDVETDGSYDSANQLN
VSGSRKIGDSAFSNQPVPDDIEFANYCEMKSKLTDISNTLYGLASSEQNENINLRVKELE
TDVHLEGLCYYYLDPQGVTQGPYQGFDIISWFEQGFFGTDLLVRLEDAPEGTPFRELGEF
MPHLKSWDGNGTIIGPSSNLEESGGLGGSMESSLPFSAAVSDSNYTFLGNDHQRPLRELD
SLSAQHIQPRISEPEARLQLHSRGQSFNDFAEPVEDTVYPGIHGTAAYSTARSSGSIHDP
MANSVNHLPPPTELTESGVPIQNDNKLHPFGLLWSELESGQSKHSNMANMPSTKGRAVPF
SANSDPAIAETWSDLHRKSSVSDPNLYPEMLTPRQLSHIEQEPSHYDLAEQIMSQQIRQQ
QQQQQQLQQRNMLSSFAHLNDSVLDPLQNQNIIHHQQLANHSSADLDHILALQRQAQLEQ
HQLQQQQQFHQQQKLLQEQQQSQVQQVLFEQLLRGQMHDPTLRQPHVDPVRANNVIDQVL
LEQHIRRELQQRSHHLPRHVDPTMEQLIQAKFGTPQGHQTDLFELLSRAQHEQEQQMHAR
QLPMGIRQRMEEERHISSVWPAEESNQIFRNHAGNHGHRGHSSGFNPLDFYQRQQRASHE
EHLNHLDRNLSLQDRLQQGFYEPGSLPFERSMSLPAGAPGMNLDVVNAMARAQGLDMQDT
IGRMQSAGQSGQFSSGIPSHNAHHPHGPNQFHVSHLDAIEGHWPEKNDQLENDWMDARFQ
QLHINAERQKRESEIKNTSQDQNLWMSDGFNDENSKRLLMELLHQKSSHQPSEPLNATSN
GMFPDKRLPSGHYSGSSSSNHLFNLHADQEAGVNNSFRVGSFGSNPGELLQEELASSVES
NEKLMYRSNSGALADRESFLAGMNATSQSIYTHSNMISKSSIGKELSELEGRKRGSKSEG
INMGRSFETQERMVEQAGLSATNNFEERSKNSHSMNSSSGVSGGNTGFYSDKIGRSNSFV
EETAKDRVPITSKGQENILLRRPPVPSASASQEGLSEMTSDPVLRGKNSSAVSDGGRRDA
AVNPVNQGSDAMASLKKEMQFRRTSSASDADVSEASFIDMLKSNTKKIPPMETHTTAGYP
ESSEAMQGGRGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIDD
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcaagctcgatctccccgacgatctcctctcctccaaaccctccgatcag
tcctggtcatccaaagttgaagtttctggaggaaatgttgaggaaaaggttcttatgggg
tcttctgatgagttgaaagatccagcagccccggataacagcataccgttgtcaccccag
tggctttatgccaagccaattgaatctaagttggaaatgcgtggtccaacttctctcggg
aactccactgatagcaaccagaaggaaggttggcggttggaaggatctgaggacaaaaaa
gattggaggcggcctgctactgagagtgaaaatagccgtcgttggcgtgaagaggaaaga
gaaactagcttgcttggtggtagaagagatcgcaggaaaacagaacgccgtgctgacaac
attccattgagagaggcaaccgacagtaaggcattgcctacaactgacaggtggaatgat
ggccgcggtgatgtacggcgtgatagcaaatggtcatctaggtggggtcctgatgacaaa
gaaaaggaaccccgaactgagaagagaacagacatggagaaggatgatgctcacagtaac
aatgagagtcagtctcttggagctaataaccgttcagctgctgagcgtgaatcagattct
cgggataaatggaggccacgccatagaatggaggttcacactggggggtcggctacttac
cgtgctgcacctggattcggaatagaaagaggacgggtggagggttcaaatttgggattt
acccttgggcgaggaagatcaagtggtgttgggagatccacaggcactattggctctgct
ctttcaggaaaaagtgaaagtgtccctgggaaaccaaggctctcatctgatggtttttgc
tacccgaggggaaagcttctggacgtttatcggcagcgaaagcctgaactatcttttgat
accatgccagatgagatggaggagtcgcccccactaactcatgttgattttgttgaacca
ttggcttttcatgcccctgatgccgatgaggaggccatccttagcgatatatggaaggga
aagattacaagtagtggggtagtatacaattcatttagaaagggaagatcaactgaaatt
attacaggtgtgggagactcagaagctgctgatggagttctgggcaatttgccctcaact
gtcactcaagagactagcacctttgaggaggctgcaaatgctgatgactacgggacttcg
tggaattatggttcacagaggaatgcgataaatgaaaaagatgttggtcataaagaaagt
gataacagagctactgaaggaaaggaccttgatggaatgtccctttcaattccaaaaagt
aatggtatctatggggatgttgagactgatggttcttatgacagtgcaaatcagcttaat
gttagtggcagtaggaaaattggagattctgccttttccaatcaacctgtacctgatgac
attgagtttgccaactattgtgaaatgaaatccaagcttaccgacatttcaaatactctc
tatggtttggcctcttctgagcagaatgagaatatcaaccttagagtgaaagagttagaa
acggatgttcatcttgagggtttgtgttattactaccttgatcctcaaggagtgacccag
gggccatatcaggggtttgacatcatttcgtggtttgaacaaggtttctttgggacagac
ttgcttgttcgcttggaggatgctcctgaaggaacacctttcagagagttgggggagttc
atgccacatcttaaatcttgggatgggaatggcactatcataggtccaagttctaatcta
gaagaatctggtggcttaggagggagtatggagtccagtttacccttttctgcagcagtt
tcagacagtaattatacatttctgggtaatgaccatcagcggcccttgcgtgaactagat
agcctttcagctcagcatattcagccaagaatttctgagcctgaagctcgattacaacta
cattcaaggggccaaagctttaatgattttgctgaaccagttgaagatactgtgtatcct
ggaatacatggaaccgctgcctattctactgcacgttcttctgggagcattcacgatcct
atggcaaactctgtgaatcaccttcctcccccaactgaactgacagaatctggtgtgcct
attcagaatgataataagttgcatccatttggcttgctatggtctgagctagagagcggc
caatcaaagcattccaacatggccaatatgccatccactaaagggagggctgtaccattt
agtgcaaattctgatccagcaattgctgagacttggtctgatcttcatagaaaaagttca
gtctctgatccgaacttgtatccggaaatgttaactcctcgccagttgtcacatattgaa
caggaacccagtcattatgatttagcagagcagattatgtcgcagcaaattcgacagcag
cagcagcagcagcagcagctccaacagcgaaatatgttgtctagttttgcacacttaaat
gatagtgtattagatcctttgcaaaatcagaatattattcaccatcaacagttagccaac
cattcttcagcagatctggatcacattttggcacttcagaggcaggctcagctcgagcaa
catcaactgcaacaacagcagcagtttcatcaacagcagaagcttttacaggagcaacag
caatctcaagtacaacaggtgctgtttgaacaattgctgcgtggtcaaatgcatgatcct
acacttaggcagcctcatgttgatcctgtaagagcaaacaatgttattgatcaggtttta
ttagagcagcacattcgacgtgaacttcagcaacggtctcaccatcttccgaggcatgtt
gatccaactatggagcagttaattcaagcaaagtttggtacacctcaaggacatcaaaca
gatttgtttgagctactgtcacgtgcacagcatgaacaggaacaacagatgcatgccagg
cagttacccatggggataaggcagcggatggaagaagagaggcatatcagttctgtctgg
ccagctgaggaatcaaatcagattttcaggaatcatgctggtaatcatggtcaccgaggg
cactcttctggctttaatcctttggatttttatcagaggcagcagagggcatctcatgag
gagcacctgaatcaccttgaccggaatctttctttacaggatcgacttcagcaagggttt
tatgagcctggttcactcccctttgagcggtcaatgtcattacctgctggtgcgccaggg
atgaacttggatgtagtaaatgctatggctcgtgcccagggtttagatatgcaggatacc
attggacgtatgcagtcggctggccagtcgggtcaattttcgtctggaattccttcccac
aatgctcatcatcctcatggtcctaaccaatttcatgtttcacatttggatgcaattgag
ggacactggccggagaagaatgatcagcttgagaatgactggatggacgctcggtttcag
cagctgcatataaatgctgagaggcaaaaaagggaatcagagatcaagaatacttctcag
gatcaaaatttatggatgtcagatggatttaatgatgagaactcaaagagactattaatg
gagttgctccatcaaaaatctagccatcaacctagtgagccgttgaatgctacgagcaat
gggatgttccctgacaagagactgccctccggtcactactctggatcaagctcctcaaac
cacctgttcaatctccatgcagaccaagaagcaggtgtaaataactcatttcgtgtaggg
tcatttggctccaatccaggtgaactcttacaggaagagctagccagcagtgtggaaagc
aatgagaaattgatgtatagatctaattctggagcattggctgatagggagtcatttctg
gcaggaatgaatgcaacgagccagtcaatttacacgcattctaacatgataagcaagtct
tctataggtaaagaactttctgagttggagggcaggaagcgggggtccaaaagtgagggg
ataaatatgggtcgatcttttgagactcaagaacgaatggttgaacaagcagggttgtca
gcaacaaataattttgaggagaggtcaaaaaactcccatagcatgaattcttcttctggt
gtttcaggtgggaatactggtttttatagtgacaagattggccgaagtaattcatttgtt
gaagaaactgccaaggatcgggttcccatcacatccaaagggcaagaaaatattctgctg
agacggcctcctgtcccaagtgcttcagcatcacaagagggattatcagagatgacttca
gatccagttctaagagggaaaaattcaagtgctgtttcagatgggggaaggcgagacgca
gcggttaatccagtaaaccaaggttctgatgctatggcatctttgaaaaaagaaatgcaa
ttccgccgtacatcatctgccagtgatgctgatgtatcagaggcgtcatttattgatatg
cttaagagtaataccaagaagattcctcccatggaaacccacaccacagctggatatcca
gaatcatcagaagcaatgcaaggtggccggggtggcaaaaagaaaggaaagaaagggagg
caaattgatcctgccctccttggctttaaagtcaccagcaatcgtataatgatgggtgaa
attcaacgaattgatgattag
DBGET
integrated database retrieval system