Fragaria vesca (woodland strawberry): 101308837
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Entry
101308837 CDS
T02666
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101308837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101308837
03036 Chromosome and associated proteins [BR:
fve03036
]
101308837
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
101308837
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
101308837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
101308837
NCBI-ProteinID:
XP_004291993
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Position
LG2:complement(43945..52352)
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AA seq
1203 aa
AA seq
DB search
MEASSNNSSNLASSVAQAIAVSLDWTSSPDARKAAVAFLESIKTGDVRVLANTAFLLVKK
DWSSEIRLHAFKMLQHLVRLRWEELNPTEHRNFANVTVDLMSEIANPSEEWALKSQTAAL
VAEIVRSEGVNLWQDLLPALVSLSAKGPIQAELVSMMLRWLPEDITVHNEDLEADRRRLL
LRGLTLSLPEILPLLYTLLERHFGAALSEAGKQQVGLAKQHASAVTATLNAVNAYSEWAP
LPDLAKYGIIHGCGFLLSSPDFRLHACEFFKLVSARKRHADTSTPEFDSAMSTVFHILMN
ASKELLHSSGVNAGAIDESNIEFAECLCESMVFLGSTNLQCIMGDSTALPLYLQQMLGFF
QHQKLVLHFQSLHFWLALLRDLMSKPKAAANSSADGSDEADKEKQKILSFVNDDICSALL
DVSFQRLLKREKILHGTSFSLGPLELWSDDVDSKGNFGQYRSKLLELIKFVTSYKPVIAG
AKVSERIDTIIKSLLLSPMPSQDLAVMESMQSALENVVSTIFDGSNVIGGGHSEVQVGLC
RIFEGLLHQLLSLNWTEPALAEVLGHYLGVMGPFLNYFPDAAGRVINKLFELLNSLPFAV
KDPSTSSARYARLQICTSFIHIAKTADKSILPHMKGIADTMAYLQKEGRLLRGEHNLLGE
AFLVMASAAGFQQQQEVLAWLLEPLSQQWTQIEWQNNYLSEPLGLVRLCVETPTMWSIFH
CITFFEKALKRSGTRKTHLSSQNNSAASSTPLHPMASHLSWMLPPLPKLLRAIHSLWSPS
VSQTLPGEMKAAMTMSDAEQYSLLGEGKPKLSKGTSTSGTGPLVTMSKEGYTEPNESDIR
NWMKGIRDSGYNVLGLATTVGDSFYKCLDSHSVALALVENIQSMEFRHLRLLVHSVLIPL
VKNCPVDLWEVWLEKLLHPLLLHSNQALSCSWSSLLQEGRAKVPDAQAILAGTDSKVEVM
EEKLLRDLTREICSLLSLIASPQLNTGLPSLEHSGQISRVDLSSLKALDSFASSSMVGFI
LKHQGLALPALQICLEAFKWTDGEAMPKVSVFCGALVVLAIFTNSMELQQFVAKDLFSAI
IQGLALESNAFISADLVGHCRDIYIYLCDRHPAPREVLLSLPCIKQHDLLAFEEALTKTA
SPKEQKQYMKSLLLLATGNKLKALVAQKTVNVITNVTTKPRNTVNVAENRVDEGEVIGLA
AIS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagcagcaacaatagcagcaacctagctagcagcgtcgcccaagccattgcc
gtctctctcgactggacctcctctcccgacgctcgcaaagccgccgttgctttcctcgaa
tccattaaaaccggagatgtgcgtgttttggcaaacacagcgttccttctagtgaagaag
gattggtcttctgaaattcggttgcatgcatttaaaatgttgcagcatttggtccggttg
cgatgggaggaattaaacccaacagaacatagaaactttgctaatgtcactgttgatcta
atgtctgagattgcaaatcctagtgaagagtgggctttgaaaagtcagacagcagcactt
gtagctgagatagtcagaagtgaaggagtaaatctttggcaggatctgcttccagctctg
gtttccttatctgcaaaaggtcctatacaagctgagttggtctccatgatgctgaggtgg
cttcctgaagacattactgttcataatgaagatttggaagctgatcggagaaggctattg
ttgcgtgggctgaccctatcgttacctgaaatcttgcctctattatacactttactagag
aggcattttggagctgccttgagtgaagcagggaaacaacaagtgggccttgcaaaacaa
catgcatctgcagtaacagctactttgaatgccgttaatgcatattctgaatgggctcca
ttgcctgatcttgctaaatatggtataattcatgggtgtggcttcttactttcttcacct
gacttccgtcttcatgcttgtgagtttttcaaacttgtttccgcaagaaagagacatgct
gatacatccactcctgaatttgattctgcaatgagtacagtttttcatattttaatgaac
gcctccaaagaacttttacacagttctggtgtcaatgctggggccattgatgaaagcaat
attgagtttgcggaatgtttatgtgaaagtatggtgtttttgggttcaacaaacttgcaa
tgtatcatgggtgatagcaccgcattacctctttatttacaacagatgctcgggtttttt
caacatcagaagctagttcttcatttccaatctctccatttttggctggcactcctgaga
gacttaatgtctaagccaaaggcagctgcaaactcatcagctgatggttctgacgaggct
gataaggaaaagcagaagattttgagttttgtgaacgatgacatatgtagtgcacttctg
gatgtatctttccaacggttgctcaagagagaaaagattcttcatggaacttcattttct
ttggggccgttggagttatggagtgatgatgttgacagcaaaggaaatttcggccagtat
cgctcaaagctgttagaacttatcaagtttgtgacctcatacaagcctgttatagccggt
gccaaggtttctgaaagaattgatacaatcattaaaagtctcttgctttctccaatgcct
tctcaggacttggctgtgatggaaagcatgcagtctgctctagaaaatgtcgtaagcact
atttttgatggatcaaatgtaattggtgggggtcattctgaagttcaagtaggactatgc
agaatatttgaaggtttgcttcatcagcttctctctttgaattggactgagccagccctt
gcggaagtacttggtcactacttgggtgtgatgggtccatttttgaactatttcccagat
gcagcaggcagagtcatcaataaactatttgagctcctaaactcactcccttttgctgtt
aaggatccctctacaagtagtgcacgatatgcaaggttgcaaatttgtacatcgtttatt
catatagccaagactgctgacaaaagtattcttcctcacatgaagggtatagctgacacc
atggcatatttgcaaaaggaaggtcgtttacttcgtggtgaacacaatcttctaggcgaa
gcatttcttgtcatggcttctgcggctggatttcagcagcagcaagaagttttggcctgg
ttattagaacccttgagccagcaatggacacaaatagagtggcaaaataactatttatct
gaaccactaggacttgttcgtctgtgtgtggagaccccaactatgtggtcaattttccac
tgtattacattctttgagaaggcacttaagagaagtggaacacggaaaacacatttgagt
tcacaaaacaactcagccgcaagttctactcccttgcaccctatggcttctcatctatca
tggatgctgccacctcttcccaaacttctacgcgccatacattccctttggtctccatcc
gtatctcaaactctacctggagaaatgaaagctgcaatgaccatgagcgatgctgagcaa
tacagtcttcttggtgaaggaaaacctaaactgtccaagggtacatcaacctccggtact
gggcctcttgtcaccatgagtaaggaagggtacacagagccaaatgaatcggatatacga
aattggatgaaggggatcagagacagtgggtacaatgtattgggcctggcaaccactgtc
ggtgactcattctacaaatgtttggacagtcattctgttgctctagctttggtagagaat
atacagtcaatggaattcaggcatttaagactacttgttcattcagttttgattcctttg
gttaaaaattgtcctgtcgatttgtgggaggtatggctggaaaagctcctgcacccctta
cttctacactccaatcaggctcttagttgctcctggtccagtcttctacaagaaggtaga
gcaaaggttccggatgcccaagccatacttgccgggactgactcaaaagtggaagtaatg
gaagaaaagctacttagagatcttactcgagagatttgttcactcctctctctcattgct
tccccacagctaaatactgggcttccatccttggagcactctgggcaaatcagccgagtc
gatctatcttcactcaaagctttagattcttttgcatcgagctctatggttggtttcatt
ttgaagcaccaaggtcttgcccttcctgcactgcagatatgtttagaagcttttaaatgg
acagacggtgaagccatgccaaaagtttctgtcttttgtggtgctttggttgttctagct
atatttacaaatagtatggaactccaacagtttgttgctaaggatcttttttctgcaatt
atccaaggtttagcccttgaatcaaacgctttcatcagtgctgatttggttggtcactgt
cgtgacatatacatatatctctgcgatagacatccggctcctagggaggttctgctctca
cttccctgcatcaaacagcatgatttgcttgcttttgaagaagctttgacaaagacagct
agtcctaaagaacaaaaacaatatatgaaaagcctgctcttattagctactggaaacaag
ttaaaagcacttgttgctcagaaaaccgtaaatgttataacaaatgtaacaacaaagcct
cgcaacacagtcaacgttgcggaaaacagagttgatgagggggaggttattggactggca
gcaatatcatga
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