Fragaria vesca (woodland strawberry): 101308859
Help
Entry
101308859 CDS
T02666
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101308859
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fve01002
]
101308859
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101308859
Enzymes [BR:
fve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101308859
Peptidases and inhibitors [BR:
fve01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101308859
Ubiquitin system [BR:
fve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101308859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
101308859
NCBI-ProteinID:
XP_004296763
LinkDB
All DBs
Position
LG4:9646233..9652387
Genome browser
AA seq
1008 aa
AA seq
DB search
MGKKVKRKARAPQKEKWVASDSPKKVAEPSDPSIEDDGDDDGVSVAKVRKPCPHIDKGVD
LNKLHAKIGSSAAVRCEDCREGAIDRKGGKGKGKHAKKKGGADSKSESKSVWLCLECGHF
ACGGVGLPITPQCHAIRHARQTRHPLVVQFDNPQLRWCFQCNTLITIDKTGENGEEKDVF
SEVAKLIKGHSSEDSSGDVESVWFGSGSVTSEIKSASNTSSLFDGRGGYVVRGLVNLGNT
CFFNSILQNLLAIDRLRCHFLNFEAPAGPLTISLKKLFADTKPEAGLKNVINPRSFFGCI
CSKAPQFRGYQQQDSHELLRCLLDGLCTEELSMRKRTRPSQNGDPSNPVPTFVDAVFGGQ
ISSTVRCVECGHSSTVYESFLDLSLPVPTRKSPPKASQPSSRARKTKLPPKRTGKVRSKI
NKDKNPVASPSVATPSTSCEHSNQVQSSSTDLNVPDRPTELNISEQSTSSGLVTKNLSAV
QESEHEQVFEDAAVLLNDFTWMDYLGDGNMLDDCDLTSENAIVSIVQDPKSTNASLIDVS
QQSGSEISDKDSKVTGVQDVKPNFSSVNSVDDELPLQVQSCEILLLPYKEDHNSEVLLLP
HKERCSITEENVGGEGEASSSFVGCGQDDFDGFGDLFNEPEVVAGPSPRPSTGEEGTTIS
LVVSESDPDEVDDTNSPVSVESCLAHFIKPELLANENAWHCENCSKSLQRQRLEAKKRQK
ATTYGLTNGCETRVQSVSLSSDTADISNISNGNIQSNTCCNHSGENLVLVEGKMNCLSEN
RTSIENAPSDKMIPVCQQQEGNSEMKDVLPTESNTSDSNNSCTLEISTQAIDSCADEPSS
AGCTSENALQTNSKVLADCESEASEDEEINSKHVKVKRDATKRVLIGRAPPILTIHLKRF
SQDARGRLSKLNGHVTFREKIELRPYMDSRCREKENYEYHLIGVVEHSGTMRGGHYVAYV
RGGERSKGKTGNEKIGHAWYYASDAHVREVSLEEVLHCEAYILFYEKT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaggttaagaggaaggccagagctcctcaaaaggagaagtgggttgcatct
gattccccgaagaaggttgccgaaccaagtgacccgagcattgaggatgatggtgatgat
gatggagtttcagttgcaaaagtgaggaaaccttgtcctcacattgacaaaggtgttgat
ttgaataagttgcatgctaaaattgggtcttcagcagctgttaggtgtgaagattgtagg
gaaggcgccattgataggaaggggggtaaaggcaagggaaaacatgctaagaagaaaggt
ggtgcagattctaaatctgaatcaaaatccgtttggctttgtctagaatgcggtcatttt
gcttgtggtggggttggacttccaataacccctcaatgccacgcaattcggcatgcaagg
caaactcgtcacccattggtggtgcagtttgacaacccacagttgcggtggtgctttcag
tgcaacacactgattaccattgataagacgggggagaatggtgaagagaaagatgtcttt
tctgaagttgcgaaattaattaagggtcattcgtcagaggactcatcaggtgatgtcgag
agtgtatggtttggtagtggcagtgtgacaagcgaaatcaaatcagccagcaatacatca
agccttttcgatggaagaggaggttatgtagtaagaggcttagttaaccttggtaacact
tgcttcttcaattctattttacagaaccttctagctattgataggttgcggtgtcacttc
ttaaattttgaagcacctgctggaccacttactatttccttgaagaaactctttgctgac
acgaaaccagaggcaggactcaagaatgttataaaccccagatcgttttttgggtgtatc
tgttccaaggcaccccagtttaggggctatcagcagcaagacagtcatgaattgcttcgt
tgtttacttgatggattgtgcactgaggagttgagtatgaggaaacgtacaaggccttcc
caaaatggggatccatcaaatccagttcctacgtttgtggatgctgtatttggaggacag
atatcaagtactgttcgctgtgttgaatgtggtcactcatcaactgtctatgaatcattc
ttagatctttcactaccagtcccaaccaggaaatctccacctaaggcttcccaaccaagc
tctcgagcaaggaaaacgaagcttccacccaagaggactggaaaggttcgatcaaaaatt
aacaaagacaagaaccctgtagcatctccaagtgttgcaaccccatcaaccagctgtgag
cattctaaccaggtacagtcaagttctactgacctaaatgttcctgatcgtcctactgag
ctaaatatatctgaacaaagtaccagcagtggcttggttacgaagaatctatcagctgtc
caagaatctgaacatgaacaagtctttgaggatgcagcagttttgttgaatgactttaca
tggatggattatcttggtgacggaaatatgttagatgactgtgatttgacttcagaaaat
gcgattgtttcaattgttcaagatcctaaaagtaccaatgcatctcttattgatgtctca
caacagagtggctctgaaatcagtgataaggattccaaggttactggagtacaggatgta
aaaccaaacttttcttcagtgaattcagtggatgacgagctcccattacaagttcaaagt
tgtgaaattttattgcttccatataaagaggatcataattctgaagttttgttgcttcca
cataaggaaagatgttctatcactgaggaaaatgtgggaggagaaggagaggcatcgtca
tcatttgtgggttgtggacaagatgattttgatggctttggggacttattcaatgagcct
gaggttgttgctgggcccagtccaaggccctctacaggggaggaaggtacaacaattagt
cttgtagttagtgagtctgatccagatgaagttgatgatacaaattctccagtctcagta
gagagttgcttggctcatttcataaagcctgagcttcttgccaatgaaaatgcttggcat
tgtgagaattgttctaaatctctgcagcgccaaaggttggaagcaaagaagcggcaaaaa
gcaacaacttatggtttgacaaatgggtgtgagactagagtccaaagtgtttctttgagt
tcagacactgctgatatcagtaatattagtaatggaaatattcaaagcaatacttgttgc
aaccattctggtgaaaacttggttttggttgaagggaagatgaattgcttgagtgaaaat
cgcacgtcaattgagaatgctccgtcagataagatgattcctgtttgtcaacaacaagaa
ggaaacagtgagatgaaagatgtacttccaacagaatcaaatacttcagattccaataac
agttgtactctagaaatcagtactcaagccattgattcatgtgctgatgagcctagtagt
gctggatgtacctctgaaaatgctttacagacaaattccaaggtattagctgattgtgaa
tcagaagcaagtgaagacgaggaaataaattccaaacatgtgaaggtgaagagggatgcg
acaaaacgggtcctaattggcagggctccacctatcttgaccattcatctaaaaaggttt
agccaagatgctcgtggtcgcttaagtaaattgaacggccatgtgacattcagggaaaaa
attgagctcagaccatatatggattccaggtgcagagaaaaggagaattatgaataccac
ctaattggggttgtggagcattctgggaccatgagaggaggccactatgttgcatatgtg
agaggtggtgaaagaagcaaagggaaaactgggaatgagaagattggtcacgcgtggtat
tatgctagtgatgcacatgtacgtgaggtttccctggaggaggttctccactgtgaggcc
tatatcttattctatgaaaaaacttga
DBGET
integrated database retrieval system
