Fragaria vesca (woodland strawberry): 101308893
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Entry
101308893 CDS
T02666
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101308893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101308893
Spliceosome [BR:
fve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101308893
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
101308893
NCBI-ProteinID:
XP_004304743
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Position
LG6:complement(419466..420893)
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AA seq
475 aa
AA seq
DB search
MSSKREHEDNEGEGYLLNSKRQKVSEEVSPASSPPVVSRREIQVRRDCPYLDAVNRQVLD
FDFEKYCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVFINLGTERVYCLPD
GYEISDPSLDDIRHVLNPKFTEEQVEKIDGNKQWSRALDGSDYLAGMVGLNNIKQSDFVN
VTVQSLMRVSPLRNFFLIPKNYEHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM
KASKNRFRIGAPSDPAEFMLWLLNTLHSDLKTEKNTSIIHDCFEGELEQSHIDADGGVLV
TESCRKTFLMLGLDMPPAPLFKDVMERNMIPQVPLFNIMKKFDGETVTEEQRYRVTRLPR
YLILHMKRFTKNNSFVEKNPTLVNFPVKNLELRDYIPLPTPKENERLHTKYDLIGNIVHD
GEPHKNKPGEGSYRVFVQRKSEEVWYEMQDLHVSEALPQMVALSEAYMQIYEQRQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagagagaacatgaagataatgaaggggaagggtacttgttaaactcgaag
aggcagaaagtgagcgaggaagtatcgccggcctcttcgcctccagtagtctctcgccgt
gaaattcaagttaggagagactgcccatatcttgatgctgttaatcgccaggttttggat
tttgattttgagaagtattgctcggtttctctatcgaacttgaacgtgtatgcatgcttg
gtatgtggaaaatattaccaaggaagaggaaggaagtcccacgcatatacgcatagcctt
gaagcaggacaccatgtgttcataaatcttggaaccgagagggtatattgccttcctgat
ggatatgaaattagtgatccatcattggatgacattcgacatgttcttaacccaaagttt
actgaggaacaggttgagaagattgatggaaacaagcagtggtctagggcacttgatggt
tctgattaccttgctggaatggtagggttaaataacattaagcaaagtgattttgtgaat
gtcactgttcaatccttaatgagagtttcgccactaagaaacttctttcttataccaaag
aactatgaacattgcaagtctccgcttgttcatcgatttggggagcttacaaggaagata
tggcatgcacgaaactttaaaggacaggtgagtcctcatgagttcctgcaggcagttatg
aaagccagtaagaatcggtttcgaataggagcgccgtctgaccctgctgagttcatgtta
tggttgctcaatacacttcactcagatcttaaaactgagaagaacacgagcatcattcat
gactgctttgagggggaactagagcaaagccacattgatgcagatggaggagtacttgtc
acagaaagttgcagaaagactttcttaatgcttggattggatatgcccccagcgccactt
tttaaagatgtgatggagagaaacatgataccgcaggtcccgctgttcaacattatgaag
aaatttgatggtgagactgtcactgaagaacaacggtatcgcgtcaccagattaccacgg
tatctgattctgcacatgaaaagattcacaaagaacaactcgtttgtggagaagaacccc
acactagtcaactttcctgtgaagaacctggagttgagagactacatccctttgccaacc
cccaaggagaatgagagattgcatacaaagtatgatttgattggcaatattgttcatgat
ggtgaacctcataaaaataaacctggtgaaggatcctacagagtatttgtacaacgaaag
tcggaagaagtatggtatgagatgcaggatctacatgtctctgaagcacttcctcagatg
gttgccctttctgaggcttatatgcagatatatgagcagcgacagtaa
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