Fragaria vesca (woodland strawberry): 101309002
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Entry
101309002 CDS
T02666
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 12 homolog A-like
KO
K03035
26S proteasome regulatory subunit N5
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101309002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
fve03051
]
101309002
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
101309002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
DUF4376
DUF6104
LAMB4
Motif
Other DBs
NCBI-GeneID:
101309002
NCBI-ProteinID:
XP_004288080
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Position
LG1:complement(11538716..11544047)
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AA seq
468 aa
AA seq
DB search
MKRSGFLSSEDNGAERGEELQSPDSNQEGGSDLDAQIEKFLNVEKQMRLSGDVAGTKKAA
TDILELCFKAGAWKTLNDQILVLSKRRGQLKQVVTALVQQAMQYIDQTPDLETRIELIKT
LNNVSAGKIYVEIERARLIKRLAKIKEEQGLIAEAADLMQETAVETFGAMAKTEKIAFIL
EQVRLCEDRQDFVRAQILSRKISPRVFDVDASKEKKKPKEGDNIVEEAPADVPSLLELKR
IYYELMIRYYSHNNDYLEICRCYKAIYEIPSVKEDPAQWIPLLRKICWYLVLSPYDPMQS
SLLNSTLEDKNLSEIPYFRLLLKQVVTMEVIQWTTLWNKFEDEFENEKNMLGGPLGDKAA
EDLKQRIIEHNILVVSKYYSRVTLKRLAELLCLSIQEAEKHLSEMVVSKVLVAKIDRPVG
IICFQTAKDSNNVLNSWATNLETLLDLVEKSCHQIHKETMVHKAALKV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagcgggtttctctcgtcagaagacaacggtgctgaaaggggtgaggagcta
cagagtccagattcgaatcaggaaggaggaagcgatttagatgctcagatagagaaattt
ctgaatgtggagaaacaaatgaggctctctggtgacgtggcgggaaccaagaaggctgcc
actgacattcttgagctttgcttcaaagctggtgcttggaagaccctcaatgaccagatt
cttgtcttgtccaaacgccgtggtcagctcaagcaggtcgtaactgcattggtccagcaa
gcaatgcaatatattgatcagacccctgaccttgaaactcgtatagagctcattaaaaca
ctaaataatgtttctgctgggaagatatatgttgaaattgagagagcacggttaataaaa
agacttgcaaagatcaaggaagagcaagggcttattgctgaagctgctgatttgatgcaa
gaaactgcggtggaaacatttggtgccatggcaaaaactgagaagattgcgttcattctt
gaacaggttcgtttgtgcgaagaccgtcaggattttgttcgtgctcaaatactgtcaagg
aagatcagtcctagggtttttgatgttgatgcttcaaaagaaaagaaaaaacccaaggaa
ggtgataatattgttgaagaagctcctgctgatgtaccatcgctcttggagttaaagcgg
atctactatgaattaatgataaggtattattctcataacaatgattaccttgagatttgc
cgttgctataaggcgatatacgagatcccttccgttaaagaggatccagcccagtggata
ccgttattgaggaaaatctgttggtacttggttctgtcaccatacgacccaatgcagtca
agcctacttaattccaccctggaggataagaatctttctgagattccatattttaggtta
ctgttgaaacaagtggtaactatggaggtcatacaatggaccactttatggaataagttc
gaggatgagtttgagaatgagaagaatatgctaggaggccctttgggtgacaaagcagct
gaagatctaaagcagaggataattgaacataatattctagttgtttcaaagtattactcg
agggttaccttgaagagacttgctgagctgctctgtctaagtatccaggaagctgagaag
catctttcagaaatggttgtgtccaaggtgctggttgccaagattgacaggccagtaggc
ataatttgtttccaaactgcaaaagatagtaacaatgtccttaattcgtgggctacaaac
ttggagacacttcttgatcttgtggagaagagctgccaccaaattcataaagaaaccatg
gttcacaaagcagctctgaaggtgtga
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