Fragaria vesca (woodland strawberry): 101309046
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Entry
101309046 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101309046
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101309046
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101309046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-RING_5
zf-C3HC4
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
101309046
NCBI-ProteinID:
XP_004296921
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All DBs
Position
LG4:12428272..12431128
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AA seq
381 aa
AA seq
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MASFAPSSSSSSSSSSDHNPIPFWTPSPSAAAFPDEEDSCSICLEPFCSDDPSTITSCKH
DYHLHCILEWSQRSKECPICWQLLVLKDPASQGLLDAVQNEKRSRARNISSIAPPTFHNS
SEDFDFEHDSFSDDSDLDERIMQHLAAASSRARYARRRERQRYSGLAPSNGFNFSHAENV
SALEQAHPTSPEERPSFTYGSPGGDSPTSPRPHVVQPPPSFICSTAANNDVPFKPRVLFG
QPTPNGSQGQIPSEMLNFPESIKSKLSAASVRYKESISKGTRGLKEKLFARNNSVKELSK
GVQREMTAGIAGVARMFERLDLTSKNPGSPTPVSDRSGGTSNFSAKGKAVLENVIVQCCN
KSSGRISDETSEAPSHIIRPT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcatctttcgctccttcttcttcttcttcttcttcttcttcttctgatcataaccca
atacccttctggactccgtcgccgtctgcagctgcttttcctgacgaagaagactcgtgc
agtatctgcctcgagcctttctgctccgatgacccctccactattaccagctgcaaacat
gactatcatcttcactgtatattagaatggtcacaaagaagtaaagaatgcccaatttgt
tggcagttacttgtcttgaaggatccggctagccaagggcttctagatgctgtacaaaat
gagaagcgctcaagggcaagaaacatatcttctattgctcccccaacttttcacaattcc
tctgaggactttgactttgaacatgattcgttctcagatgactccgatttggacgagcgt
attatgcagcatcttgctgctgcttctagcagggctcgttatgcacgcagaagggaaaga
cagagatattcgggactggccccttccaatggatttaatttttcccatgctgaaaatgtg
tctgctttggagcaagcacacccaacttctcctgaagaacgtcctagtttcacttatggt
tcaccaggaggtgattcaccaacttctccaagaccacacgttgttcaacctccaccatct
tttatctgcagcactgctgccaacaatgatgttcctttcaaaccaagagttctctttggc
cagccaacacctaatggttcacagggacaaatcccatccgagatgctaaatttcccagag
tctatcaagtccaagctgtctgctgcttcagtcaggtacaaagagtccatctcaaaagga
actcgaggtttgaaggaaaagctgtttgctcgtaacaactcagtcaaggagcttagcaaa
ggagttcaacgtgagatgactgcaggaattgctggtgttgcacgaatgtttgagcgccta
gaccttacctcaaagaatcctggttcccctacgccagtttctgatcgtagcgggggtact
tcaaacttctctgccaagggaaaggctgtgttagaaaatgtgattgttcagtgttgcaat
aaaagcagtggaagaatttctgatgaaacttcagaagcaccctctcacatcatcaggccg
acttga
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