Fragaria vesca (woodland strawberry): 101309075
Help
Entry
101309075 CDS
T02666
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101309075
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101309075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101309075
NCBI-ProteinID:
XP_004305261
LinkDB
All DBs
Position
LG6:10465435..10467609
Genome browser
AA seq
405 aa
AA seq
DB search
MRNALVLLILHTIASSNFSFGHGQTTFNVLDYGAAGDGERDDSKAFLEAWNASCSTYASE
GTTTLVIPAEKTFLLQPTTFSGSCNSGNGIRVEIMGKIVAPKNPDEWKECVESWLSFGNL
SNLIINGTGEINGQGSPWWSNITTQVNALHFFNCSNLRLSGVTHVDSPKAHISINRSNNV
TVSDIHILAPHDSPNTDGIDISVSTYVNIHDSKIATGDDCIAINNGSSFINITNIACGPG
HGISVGSLGVNRSYQTAEQINVRNCSFNGTQNGARLKTWQGGSGYARKITFENITLTDAK
HPIIIDQHYCNGKHDCPNSTQAVQVSDVTYSNIQGTSSSMEAIVFNCTQIPGCTNIVMKQ
INITSAIAYQNISASCINANGTCSTTVPQVSCLKTNETMSFNLYT
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgctcttgtccttttgattttacacactattgcttcatcaaattttagtttt
ggacatgggcaaacaacctttaatgtgcttgactatggtgctgctggagatggcgagaga
gatgattctaaagcattcttagaagcatggaatgcatcatgttcaacttacgctagtgaa
gggacaacaacactagtaataccagcagaaaaaacattccttttgcaacctaccaccttc
tcaggttcttgcaattctggcaacggtatccgggtcgagattatggggaaaattgtggca
ccgaaaaatccagatgaatggaaagagtgtgtagaatcgtggttatcttttggaaatctg
agcaacctcatcataaacggaacaggagaaattaatggccaaggttcaccttggtggagc
aatattaccacccaagtaaacgctctacacttcttcaattgcagtaatcttcggttaagt
ggagttacacatgttgacagtccaaaggctcatattagcatcaatcgtagtaataatgtc
accgtctccgatattcatattcttgcacctcatgatagtcccaacacagatggtattgac
atctctgtctcaacatatgtcaatattcatgactccaaaatagcaactggtgatgactgt
attgccattaacaatggttcatccttcatcaatatcaccaatatcgcatgtggacctggt
catggaattagtgtgggaagtttaggggtgaatagaagttatcagacagcagaacaaata
aacgtacgaaattgtagtttcaacggaacacaaaatggagctagacttaagacatggcag
ggtggctctgggtatgctaggaagataacattcgaaaatataacactaacagatgcgaag
caccccattatcattgaccaacattattgtaatggaaaacacgactgtccaaactcgact
caggcagtacaagtgagtgatgtcacatatagtaatattcaaggaacttcttcaagtatg
gaggccatagtatttaactgcacacagattcccggttgtactaacattgtgatgaaacaa
atcaatatcacttcggcaattgcttatcagaacatttctgcctcttgtatcaatgcgaat
gggacttgcagcacaacggttccccaagtctcttgcttgaagacaaatgaaacaatgtct
ttcaatctatacacatag
DBGET
integrated database retrieval system
