KEGG   Fragaria vesca (woodland strawberry): 101309085
Entry
101309085         CDS       T02666                                 
Name
(RefSeq) small RNA degrading nuclease 1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101309085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fve03009]
    101309085
Ribosome biogenesis [BR:fve03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    101309085
SSDB
Motif
Pfam: DNA_pol_A_exo1 DUF3450 TMF_DNA_bd
Other DBs
NCBI-GeneID: 101309085
NCBI-ProteinID: XP_004288001
LinkDB
Position
LG1:10518357..10521719
AA seq 524 aa
MEDFLATAEKKVLVEIVKVAQKRGMKGSKGDWKQFLTSYDKKFGSSLSDPGKRSTDVLTS
FVRSFDNQDDLQLFARVVECNSNRQGVAQFLNNSPANESQEQKLVRVTLEHPQYPIDYAF
PSHNQDWVVTKLKKKSKEMISNVMLAVDCEMVLCEDGTEALVRVCVVDRNLEVKLDELVN
PDKEVADYRTEITGVAASELAGVTCTLADIQKSFKKLLSDGTILIGHSLCNDLQALKIDH
KMVIDTAYVFRYSDGPIYRKPSLNNLCKAVLGYEVRKKGSPHNCLDDACAAMKLVLAKVE
REVGDTIPSVQEDVPEINTAKLLLHRIPRTVPSNELHKAIPGNFTLEVKKPSIKAKGDIY
SAFATFKNEQEAQLAYEKLKGTQEEDSTGKPQKLIEFKVSTGVITDFYVRKMAHNGSLDQ
VSSKRALEVEENTGANKKQKTGQTIEDETMPDLDHCCDHLKEIERLKEEQEKLLKQCSDQ
LKDIEGLKQEIKNREYEISMLKKSQVPEEQEKRLHKKKDKKKRK
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggaagatttcctcgccaccgcagagaaaaaggtgcttgtggagatagtgaaggttgcc
cagaagcgaggaatgaagggttctaaaggtgactggaagcagttcctgactagctatgat
aaaaaattcgggtccagcttgagtgaccctggtaaaaggtcaaccgatgtgttgacttct
tttgttaggagttttgataatcaggatgacttgcagctatttgccagagttgtagaatgc
aattcgaatcgacaaggtgtggctcagttcttgaacaactctcccgcaaatgagtcccag
gagcagaagcttgtccgtgtcactcttgagcacccgcagtatccaattgactatgcgttc
ccgtcacataaccaggactgggtagttacgaagctcaagaagaagtcaaaggagatgata
tcaaatgtgatgcttgctgttgattgcgagatggttctatgtgaagatggaactgaagct
ttagtgagggtgtgtgttgtggatcggaacttagaggttaaactggatgaactagtgaac
cctgacaaagaagttgccgattacagaactgagattacaggagtggctgcatcagagttg
gctggagttacttgtactttagctgatatacagaaatcgttcaagaagttgctgtcagat
gggactatcttaattgggcacagtttgtgtaacgacctgcaggcattgaagatagaccat
aaaatggtgattgataccgcatatgtatttagatactcggacgggcctatttatagaaag
ccttcgttgaataatttgtgcaaggctgtgttgggctatgaagttaggaagaaaggttct
ccacataattgtctagatgatgcctgtgctgcaatgaaacttgttcttgctaaggtggag
cgtgaagttggtgataccattccatcagttcaggaggatgtacctgaaattaatactgcc
aagctactccttcacaggataccaagaacagtgccttcaaatgagttgcataaagccata
cctgggaacttcaccttagaagtcaagaagccatcaattaaagccaaaggagatatatat
tctgcttttgctacatttaagaatgaacaagaagcgcagctagcatatgaaaaactcaaa
ggcacccaagaagaggactcaactggaaagccacaaaaacttattgaatttaaggtcagc
acaggggtaattactgatttctatgttcgtaaaatggcacataatggttccttagaccaa
gtctcttctaagagagctctcgaagttgaggagaacacaggtgcaaataagaaacaaaag
acaggtcagacaatagaagatgagactatgccagacttagaccactgttgtgatcatctc
aaagagatagaaagattgaaggaagaacaagaaaagctattgaaacagtgctcagatcag
ttaaaagatattgaaggattgaagcaagaaattaaaaatagggaatatgaaatttctatg
ctgaagaagagccaagttccagaagaacaagaaaaaaggctgcataagaaaaaggacaag
aagaaacggaaataa

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