Fragaria vesca (woodland strawberry): 101309220
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Entry
101309220 CDS
T02666
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101309220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101309220
03400 DNA repair and recombination proteins [BR:
fve03400
]
101309220
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101309220
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101309220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
101309220
NCBI-ProteinID:
XP_011458822
LinkDB
All DBs
Position
LG2:complement(19280972..19287700)
Genome browser
AA seq
977 aa
AA seq
DB search
MLQTPPFKGANVFMSRKLVPPEIFDALHDALKLNGANVVLCCDPSRTGPDDFHVIASSDH
EKFEDLRAKGCQLLGPQCVFSCANEHRSLPKQGFTCCLALDGVNVLASGFEADEKIKIRN
LITSMGGVLHTKTSLDVSFVIAKDVLATKYKWALYTLKKPVLTINWLYQCCKEHRIVPQE
SFRVLPFSGLMISVTRIPADERKKIEKLVIENGGQYSGELTKKCTHLICDAPEGDKYKVA
QKWGYIYIVTRKWFDQSIARRACLNEESFPVQGDSLSSKKIVKGCFASQNSQSNRSGFLQ
AAPPSVVADSNFTASTCGGIVDSDLEASVSQSMLPKSSCAPVFCKEGDSKVPPLESKYEV
TLEDCVADDSESEENDLYLSECRISLVGFEASEMRRLVNIIRRGGGTRYMSFNDRLTHIV
VGTPSEIEKKEVRGFAACGVIHVVRATWLEDCDRQKKEIPVLQQHSACDILLPKGALTGT
SGMIQGQISTIHQRMPSDQLCGNRSVATGMDLLEKNRKEVSEINRDDDRSVKAAVRSFDK
NRLPVIKDKSKVQLHDKTRGQQKIHLESSVQNGKPSSVFKGKLFRFSDSFPEDRRGEIIE
WVNQGGGLTIDAHLKQKAHFTIECHGVIPRSVDSTHTTYVSSHWIRSCLEDGYLLDVSNH
ILYTPLPCRTPLPGFEHFRFSVSQYEEKDRLLLRNLCFTLGAKFVEKLNKKVTHLLCKFT
SGSKYEAACKWGTHRVTCDWIYECVKQNKVIALDQYYPKEVTAEDQEAGLCTTSQFPTQD
VQMISVGNPSECPSQSQDRSFSPFEAIGRRNENIREEAKESSCTKKARIFEDVEQSGLLS
SGISISNPPNTTGNQKANTFGEVSQAVPDVASAIEDLLEQTTKIHDQSSSESIFASDCAM
LGHDPPRPLSLSGLSKHWLNSGGKKDDTNDPSGKQTAGLYDQFSETQTDSQVIGYEEDLS
GRQMLIDSFRTRSSSRK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaacgccgccgtttaagggcgccaacgtcttcatgtcgcggaagctcgtcccg
ccggagattttcgacgcgcttcacgacgcgctcaagctcaacggcgccaacgtcgtcctc
tgctgcgacccctcccgcaccggccccgacgacttccacgtcatcgcttcctccgatcac
gagaagtttgaggatctcagagccaagggctgccaactgctcggtcctcaatgcgtgttt
tcttgcgcgaacgagcacaggtcgctgcctaaacaaggctttacttgctgccttgcattg
gatggtgtcaatgtacttgcctctggttttgaggcagatgaaaagattaagataaggaac
ttaataacgtcaatggggggagttttacatactaaaacatctttggatgttagctttgtc
attgcaaaggatgttttagctacgaaatacaagtgggctttatatacattgaagaagccc
gtccttactataaattggttatatcaatgctgcaaagaacatcgcattgttcctcaagaa
tcctttagggttcttccgttttctggcttgatgatctccgtaaccagaattccagcagat
gaacggaagaagattgaaaaacttgtcatcgaaaatggtggacagtattctggtgaactt
acaaagaagtgcacacatttgatttgtgatgctccagaaggtgacaagtacaaggttgca
caaaagtggggttatatttatattgtaactcggaaatggtttgatcaatcgattgctaga
agagcttgtctaaatgaggagtcctttccagttcaaggtgattctttatcttcaaagaag
attgtaaagggttgctttgcttcacaaaatagccaaagcaatcgtagtgggttcttgcaa
gctgcaccgccatcggtggttgcagattcaaattttacagcttctacttgtggtgggatt
gtagattctgatttagaagcttctgtttcacaaagcatgcttccaaaatcttcttgtgcc
cctgtattttgtaaagagggggatagcaaagtccctcccttggaatcaaaatatgaggtg
acccttgaagattgtgttgctgatgattctgagtctgaagaaaatgacctgtacttgtca
gaatgtagaatatcacttgttggttttgaagcttctgaaatgcgtcgattggttaatatt
attcgcagaggtgggggcacccgttatatgtcattcaatgataggttgacacacatagta
gttggaactccttctgaaattgaaaagaaggaggtacggggatttgcagcttgtggtgtc
attcatgtggttagagccacctggcttgaagattgtgatcgccagaagaaagagatacct
gttctccagcagcatagtgcctgtgatatacttcttcctaaaggagcactgactggtaca
agtggtatgattcaagggcaaatttctactattcatcagaggatgccttctgatcagtta
tgtgggaataggagtgtggcaactggaatggatttattggagaaaaatagaaaagaggta
tcagaaataaatagggacgatgacaggtccgtgaaagcagcagttagatcattcgacaag
aacagactacctgtcataaaggataaaagtaaggtccagttacatgacaaaacaaggggc
caacagaagatacatctggaatcaagtgttcaaaatggcaaaccttcttctgtatttaaa
gggaaacttttccgcttttcagattcctttcctgaagacaggagaggtgaaatcattgaa
tgggtaaatcaagggggaggattgacaattgatgctcatctaaagcagaaggctcacttc
actattgaatgtcatggtgtgatacccagatctgtggactctactcatactacatatgta
tcaagtcactggatccgatcatgtttggaggatggatacttgctggatgttagtaatcac
attctttacactcctcttccctgccggactccgttgcctggattcgaacactttcggttt
tctgtttcacaatacgaagagaaagatagactgttactacgaaatttgtgttttacactg
ggagctaaatttgtggaaaaactgaataagaaggttacccatttgttatgcaagtttacc
agtggaagtaagtatgaggctgcttgtaaatggggaacacatcgagttacctgtgactgg
atatatgagtgcgtgaagcagaataaagtcatcgctctcgaccaatattatcctaaagaa
gttactgctgaagatcaagaggcagggttgtgtactacaagtcagtttcctacacaagat
gttcaaatgatatctgtgggcaatccatctgagtgtccaagtcaatcacaagatcggagc
ttctcaccctttgaagccattggtcgtagaaatgagaatatcagggaagaagctaaagaa
tcaagttgcactaagaaggcaaggatttttgaagatgttgaacaaagcggtcttctttct
tcagggataagtattagcaatcctccaaatacgactggaaaccagaaagcgaacactttt
ggtgaagtatcccaagctgttcctgatgtagcttctgctattgaggacttgttggagcag
acaaccaagatacatgaccagagttcatcagagagtatttttgcatcggattgtgcaatg
cttggtcacgaccctccgcgtcctctctccctgagtggactatcgaaacactggttaaac
agcggcgggaaaaaggatgacactaacgatccgtctggaaagcaaactgctggattgtat
gatcaatttagcgaaacacagaccgattctcaggttattggatatgaggaagatttgtca
ggccggcaaatgcttatagacagttttcggacgcgaagtagcagtaggaaatag
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