Fragaria vesca (woodland strawberry): 101309245
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Entry
101309245 CDS
T02666
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101309245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101309245
03036 Chromosome and associated proteins [BR:
fve03036
]
101309245
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101309245
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101309245
PBAF complex
101309245
GBAF(ncBAF) complex
101309245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101309245
NCBI-ProteinID:
XP_004297565
LinkDB
All DBs
Position
LG4:complement(20391874..20394134)
Genome browser
AA seq
535 aa
AA seq
DB search
MNNSNNNNQAKNVGVPPHFGNPGAVPQSMSINHQPHLLSQSQPQAQGSSHFPGHFQLSEP
QPQAMTQAQYLAQNQAAHAQFVHLQAQAQSLAQLHSASPGVSSPSIATPSTGTAKRANQK
PPSRPQGSSQANTGPLFKNMELTPAARRKKRKLPDKQIPDKVAALLPESGLYTQLLEFEA
RVDAALARKKVDIQESLKCPPRVQKTLRVYVFNTFESQTPTNPVKKDADPPTWSLKIIGR
LLEDGRDPVLAGMPHKSRVKFSSLFKKITIYLDQSLYPDNPVILWESTRSPALHDGFEVK
RKGDKEFSAVIRLEMNYVPDKFKLSPALTEVLGIDTETRPRVIAALWHYVKARKLQNPND
PTFFMCDPPLQKIFGEEKIKFSKVSEKIAMHLSPPQPIHIEHKMKLSGNCPAGTTCYDIL
VDVPTPLEKEMSAFLASTERNKEIDACDELICASIKKIHEHRRRRAFFLGFSQSPAEFIN
TLIASQSKDLKLVAGDASRNAEKERRSDFYNQPWVEDAVIRYLNRKSGSDAPGST
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaataatagtaataataataatcaggccaagaatgtgggagtgccgccccattttgga
aatcctggggctgtgccacaatcaatgagcataaaccatcagccgcatcttctctcgcag
tcacaacctcaagcacaaggctcgtcgcattttccggggcactttcagttgtctgagccc
caaccgcaggcaatgacacaggcacagtatctagctcaaaatcaagctgcccatgcccag
tttgttcacttgcaagctcaagctcaatctctggcccaattgcattctgccagtccaggt
gtttcgtcaccctccatagcaacgccaagcacaggaactgccaagcgagctaaccaaaag
ccaccttcccggcctcaaggttcatctcaggccaatacaggtcctttgtttaaaaacatg
gaactgaccccagctgctcgtaggaagaagcgaaagctacctgataaacagataccagac
aaagtggctgcacttctgccagagtctggtctgtatactcagttgcttgaatttgaggct
cgtgttgatgctgctctggcaagaaagaaggttgacatccaggagtcgcttaaatgtcct
ccccgtgttcagaagacacttagagtttatgtattcaacacctttgagagccagacacca
acaaatcctgtgaagaaggacgcagatccccctacttggtctcttaagataatcgggagg
ctattggaagatgggagggatcctgtgctggctggaatgccacataagtcgagggttaaa
ttttcttccctctttaagaaaattaccatatacttggaccaaagcctctatccagacaac
cctgtgattttgtgggaaagtactcgttcacctgctcttcatgacggctttgaggtgaaa
agaaaaggggataaggagtttagtgcagtaatacgattagagatgaattatgtacctgat
aaatttaaactttcacctgctctgactgaagttctgggaattgatacggagactcggcca
agagttatagctgctctttggcattatgtgaaagcccggaagttgcagaacccaaatgac
cctaccttcttcatgtgtgatcccccacttcagaaaatttttggagaagagaagataaag
ttttctaaggtttcagaaaaaatagcaatgcacttatctcctccacagcctatacatata
gagcacaaaatgaaactttcaggaaactgtccagctggaactacttgttatgatatactg
gttgatgtacctacgccactagagaaagagatgtctgcattcctggcaagcaccgaaagg
aacaaagagattgatgcttgtgatgaattgatatgtgcgtcgataaaaaaaatccatgaa
catcgtcggcggcgggcattctttcttggtttcagtcagtctccagcagagtttattaat
actctgattgcttctcagagcaaggacctaaagcttgttgctggagatgctagtcgtaat
gcagaaaaggagcgccgctcagatttctataatcaaccctgggtcgaggatgctgttata
cgttacctgaaccgcaagtctggaagcgatgctccaggtagcacttga
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