KEGG   Fragaria vesca (woodland strawberry): 101309425
Entry
101309425         CDS       T02666                                 
Name
(RefSeq) splicing factor U2af large subunit B-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101309425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fve03041]
    101309425
Spliceosome [BR:fve03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101309425
 Complex B
    101309425
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF6088
Other DBs
NCBI-GeneID: 101309425
NCBI-ProteinID: XP_004293510
LinkDB
Position
LG3:2900617..2905667
AA seq 523 aa
MSDYDNSKHKSHGSERESSWRERERGHDRERDDDRYSRDTRDYKDRSGRFDRGRNKYSGY
SGRRNQDYDRSRDYEQDRHHDHDQDRDRRHRHRSPSPSREEDRDRSTRSRSKSKRASGFD
MAPPAGAVLPSAASSGFPQTMPGVVQNVMSFGTAYPTLPMMPAQAMTQQATRHARRVYVG
GLPPLANEQTIATFFSQVMAAIGGNSIGSGDAVVNVYINHEKKFAFVEMRTVEEASNAMA
LDGIIFEGVAVRVRRPTDYNPTLAAALGPNQPSPHLNLAAVGLTQGAVGGAEGPDRIFVG
GLPYYFTEAQIRELLQSFGPLRGFDLVKDKDTGNSKGYGFCVYQDPAVTDIACGALNGLK
MGDKTLTVRRATANSVQSKSEQENILVQAQQHIAMQKMAMQVVDMNSFGNGMASVTTEMP
TKVLCLTEAITAEQLGDDEEYVEILEDMKDECSKFGTLLNVVIPRSNQDGEESSGVGKVF
LEYSDTGSCANAKNVLGGRKFGGNIVHAYYYPEDKYSSKDYSA
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtcagactacgacaacagcaagcacaagtctcatggatcggagcgtgagagctcgtgg
agggagcgagagaggggtcatgatagggagagagatgatgacaggtattcgagagatacg
agggactacaaggataggagtggaaggtttgacagagggaggaacaagtatagtggatat
agcggtcgtcgaaatcaggattatgacaggagtcgtgattatgaacaagataggcatcat
gatcatgatcaagatagagataggaggcatagacataggtcgccttcgccttcaagggaa
gaagatagggatagatcaacccgttctcgttcaaagagcaagcgcgcaagtggttttgac
atggcaccacctgctggggcagtgctaccttctgctgcttcttcaggttttccacaaaca
atgccgggagtggtacaaaatgtaatgtcgttcggaacagcatatcctactcttcccatg
atgccagcccaagccatgactcaacaggctacaaggcatgcacgacgggtatatgttggt
gggcttcccccactggccaatgagcagacaattgccacgttctttagccaagtcatggct
gccatcggaggcaattcgattggttcaggtgatgcggtagtaaacgtctacataaatcat
gagaagaagtttgcatttgtggagatgagaacggttgaagaagcaagtaatgcaatggcc
ttagatgggattatatttgagggtgttgctgtgagggtacgaaggccaacagactacaat
ccaaccttggctgccgcccttggtcctaaccaaccaagtcctcatctcaacttggctgct
gtggggcttacacaaggtgctgttggtggagctgagggacctgatcgtatctttgtgggt
ggactaccatactacttcactgaagcacagataagagaactgctgcaatcctttggacca
cttcgtggatttgacctcgttaaggataaagatacgggaaattctaaaggatatggattc
tgtgtttatcaggatccagctgtgactgatattgcctgtggtgctcttaatggcttaaaa
atgggagataaaactctaactgtccggcgtgctacagccaacagcgtgcaatctaaatca
gagcaagaaaatatcttggtacaggcacaacagcatatagctatgcagaaaatggcgatg
caggttgttgacatgaattcttttgggaatgggatggcatcagtaactacagaaatgccc
acaaaagtcctttgtttgacagaggcaattactgctgaacaactgggtgatgacgaagag
tacgtagaaatattagaagacatgaaggatgagtgcagcaaatttggaactctgttgaat
gtagttattccccgttccaatcaagatggagaagagagttcaggtgttggaaaggtcttc
ttggaatattctgacaccggaagttgtgccaatgcaaagaatgtacttggtgggaggaaa
tttggagggaacatagtgcatgcgtattattatcctgaagacaagtactctagcaaagac
tatagtgcgtaa

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