Fragaria vesca (woodland strawberry): 101309586
Help
Entry
101309586 CDS
T02666
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00531
Glycosaminoglycan degradation
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
101309586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fve00536
]
101309586
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
101309586
Glycosaminoglycan binding proteins [BR:
fve00536
]
Heparan sulfate / Heparin
Enzymes
101309586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
101309586
NCBI-ProteinID:
XP_011457618
LinkDB
All DBs
Position
LG1:2440561..2446496
Genome browser
AA seq
559 aa
AA seq
DB search
MGSQNWRMGMCFWVCLIGFLSFIHCVSSEGEGIGGGSVEALIRIDGKEAIAKVDEDFICA
TLDWWPPEKCDYGTCSWGKTSLLNLDLSNTILSNAIKAFSPLKLRLGGTLQDQIIYDTED
NKKPCPPIPFVENNTTLFGEMFGFNEACLPMKRWDELNSFFLRTGAKIVFGLNVLTGKTF
KNNIPAIGDWDFTNAESFIRYTVKNNYSVAGWELGNELCGKGVGTSISASQYANDSASLR
NIVQEIYKGGAGPKPLILAPGGFFDGPWFKEVADKSTTTLDALTHHVYNLGPGVDNNLIE
KILDPESLDSMVDTYSKLQNILKTSATSATAWVGESGGAWNSGHHLVTDAFVFSFWYLDQ
LGMSAVYDTKTYCRQTLVGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLATRFGGPKK
IRAYTHCAKQSKGIVVLLINLHNTTVVQARVAFNSTWSLRHRHKSHKSYRSHMKELNGLR
SRAERVRGDREREEYHLTPKDGNIQSQTMLLNGNALNLDSSGNIPTLEPVFVNSSQPIIV
APFSIVFVHIPYVVPPACR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcaaaactggagaatggggatgtgtttctgggtgtgtttgattggtttcttg
agcttcattcattgtgtgagttcagaaggagagggaataggaggaggcagtgttgaagct
ttgattagaattgatgggaaagaagccattgcgaaagttgatgaagattttatctgtgca
actttggattggtggcctcctgagaaatgtgactatggaacttgcagctggggcaaaact
tctctccttaatttggatctaagtaatactatcttatcaaatgccataaaagctttttca
ccattgaaacttagattgggtggtaccttgcaagaccaaatcatatatgatacagaagac
aataaaaaaccttgccccccgattccttttgttgaaaacaacacaacattgtttggtgag
atgtttggttttaatgaggcttgcctaccaatgaagagatgggatgaactaaactccttc
tttctgagaacaggggctaagattgtctttggattaaatgtcctcacgggaaaaacattc
aagaataatatccctgcaattggagactgggacttcaccaatgccgaatctttcattcga
tacactgtcaaaaataactactctgttgctggatgggagcttgggaatgagctatgtggg
aagggagttggaacgagcatatcagcaagtcagtatgccaatgattcagcttctctgcgt
aacatagtacaggaaatatacaagggtggtgctggaccaaagccactaatcttagcacct
ggagggttctttgatggaccttggttcaaagaagttgcagataaaagcactacaacttta
gatgcgctcacacaccatgtatataatctagggccaggggttgataataaccttattgaa
aagattcttgacccggagtctctggatagtatggtggacacatatagcaagcttcaaaac
atcctgaagacctctgcaacttcagcaacagcatgggttggggaatcaggaggtgcttgg
aacagtggtcatcatcttgtcacggatgcattcgtgtttagtttctggtatctggaccag
cttggtatgtctgcagtttatgataccaaaacatattgcagacagaccttggttggtgga
aactatggtttactcaacactactacttttgttcccaatccagactactacagtgctctt
ctttggcaccgattaatgggaagaaatgtactggcaacgaggtttggtggaccgaaaaag
atacgtgcttatacacactgtgcaaaacaatctaaagggattgtagtcctattgatcaac
ctacacaacaccaccgttgttcaggcaagggttgccttcaacagtacctggagcttgcga
catagacacaaatctcacaagtcttatagatcacatatgaaggaacttaatggtctaaga
agcagggcagaaagagtgagaggtgacagagaaagagaagaataccatttgacaccaaag
gatggaaatatacagagccaaaccatgctgcttaatggaaatgctttgaatctggattca
tctgggaacatacctacattagaacctgtttttgtaaattcatcgcagccgataattgtt
gctccattttcaattgtttttgttcacataccatacgttgttcccccagcttgcaggtag
DBGET
integrated database retrieval system
