KEGG   Fragaria vesca (woodland strawberry): 101309651
Entry
101309651         CDS       T02666                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101309651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101309651
   03041 Spliceosome [BR:fve03041]
    101309651
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101309651
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101309651
Spliceosome [BR:fve03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101309651
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 101309651
NCBI-ProteinID: XP_004303649
LinkDB
Position
LG6:complement(23706969..23710110)
AA seq 395 aa
MEDFSEQSRFDDNQIGYDGEEQFQEQYEQPQEQQFDSGREFEGNHNNSNNNVDSEGNEFR
DSSFSSRADAAAGKLFVGGVSWETTEDTFTNYFSKYGEIADSVIMLDKHTGRPRGFGFIT
FADSVAADAVLEEEHVIDGRVVEVKRTVPREDIGFKGGSKRKKIFVGGIPTSLSDEELGD
YFSTFGSIVEHQIMVDHKTGRSRGFGFVTFENEDSLDKVFSEGKIHELGGKQVEIKRAEP
KRPGDFSGSAARSYGVLGGAAAGYGGYNSGGRFNGKMGRGYGGPGGYGAAYGNYNNYAGN
YAANYAGFYGGYGGYGYGFGFGGPMYGNAGYGASGYGMPGGYGAPTGYGGGKGYGSGSAD
RGGRGRGRGGSSYNAGRGYGRSGDSTTGRYHPYQN
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggaagatttctcggagcagagtcgattcgatgacaaccaaatcgggtatgatggggag
gaacaatttcaagaacaatatgaacagccgcaggagcagcaatttgattccggccgtgag
tttgagggcaaccataacaacagcaacaacaacgtagatagtgaaggcaatgagtttagg
gattcttccttcagtagtcgtgccgatgccgccgcagggaaactattcgtaggaggcgtt
tcgtgggagaccactgaagatacctttaccaattacttcagcaaatatggagaaatagca
gattctgttataatgttagacaaacatactgggaggccaagggggtttggattcataacg
tttgctgattcagtggctgctgatgcagttttggaggaagaacatgtcatagatggcaga
gtggtggaggtgaagagaactgttcccagggaggatatcggatttaaggggggatcaaaa
agaaagaaaatttttgttggtgggataccaacatcattgtctgatgaggaattgggtgac
tatttctctacatttggtagcattgttgagcaccagattatggtagatcataaaactggg
aggtctagaggttttgggtttgtcacttttgagaatgaagactctcttgacaaggtattc
tcagaaggaaaaatacatgaacttggaggcaaacaggtggaaataaaaagggctgaacct
aaaaggcctggtgactttagcggtagtgctgcaaggtcatatggtgtcttaggcggcgct
gcagctggatatggtggatataattctggaggtcgtttcaacggaaaaatgggcaggggc
tatggtggacctggtggatatggtgctgcctatgggaattacaacaattatgctggaaac
tatgctgcgaactatgcaggtttttatggtggttatggtggatatggatatggttttggg
tttggtggacccatgtatggcaatgccggatatggagcgagcggttatggcatgcctggt
ggttatggcgctcctactggttatggtggtggtaaagggtatggaagtggctctgctgat
cggggtggtaggggtcggggtcgtggtggtagcagttacaatgctggtagaggatatggt
aggagtggtgattctacaaccggaagatatcatccttatcaaaattga

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