Fragaria vesca (woodland strawberry): 101309713
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Entry
101309713 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101309713
04121 Ubiquitin system [BR:
fve04121
]
101309713
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101309713
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101309713
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101309713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
HypA
zf-RING_5
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
101309713
NCBI-ProteinID:
XP_004294935
LinkDB
All DBs
Position
LG3:23192736..23194924
Genome browser
AA seq
375 aa
AA seq
DB search
MEEAIAARYWCHMCSQMVNPIMGEEMKCPFCQSGFIEEMDGTPRDNPEADSEFGPDRPLS
LWAPILMGMMSNPRRRRRLRRQEFDEEEDEDNENDDVHGGDTELDRELESIIRRRRRSSS
TILQLLRGIRAAGLASESDNSETDRDRDRDRDRERERERLILINPFNQTIILHGSYDSSQ
GQNNNHTPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAKKEAVEGLPTVTVKENLQC
SVCLDDLEIGVEAKEMPCKHKFHGECILPWLELHSSCPVCRFLLPADEAKCDSNNSRNSS
NQSDGENIDGDGEEGDVDGDGIGRNGSGRRFQIPWPFNLFSSTESQTSGSGGNSSSSANA
TGSGNGSASSQPDDN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaatagcagctaggtattggtgccacatgtgttctcagatggtgaacccc
atcatgggagaagaaatgaaatgccctttttgccaaagcggatttattgaggaaatggat
ggcaccccaagggacaatcctgaagccgactctgaatttgggcctgatcgacctctctcc
ctctgggctccaatcttgatgggcatgatgagcaatccccgcagacgacggagattgaga
cggcaagagtttgatgaggaggaggatgaggataatgagaatgatgatgtccatggggga
gacactgaactggacagagaacttgaatcaatcatccgaaggaggaggagaagctcatct
accattcttcaactgcttcgaggcattcgagcagctggcttggcatctgaatcagataat
tctgagactgatagggacagggatagggatagggacagagaaagggaaagggaacgccta
attcttatcaatccttttaatcaaaccatcattcttcatggttcgtatgattcaagtcag
ggtcaaaacaacaatcacacccctattggttccttaggtgattacttcattgggcctggt
ctggacttattgctgcaacatttggcggagaatgatcctaatagatatggaacaccacct
gcaaaaaaggaggcagtggaaggtctgcccactgtgacagttaaggagaatttacagtgt
tctgtgtgcttggatgatttggagattggggttgaggcaaaagaaatgccatgtaagcat
aaatttcatggagagtgtattctgccatggctggagcttcatagttcctgcccagtatgc
aggtttctgttgcctgctgatgaagccaaatgcgattccaataattctaggaacagcagt
aaccagagtgatggcgagaacattgacggtgatggggaagagggagatgtggatggggat
gggattgggagaaatggaagtggcagaaggtttcaaattccatggcccttcaatctgttt
tcatccacagaatctcaaactagtggcagcgggggtaattcttcgtcatcagcaaatgca
actggaagtgggaatgggagtgcttcgtctcaaccagatgacaattga
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integrated database retrieval system
