Fragaria vesca (woodland strawberry): 101309759
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Entry
101309759 CDS
T02666
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101309759
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101309759
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
101309759
NCBI-ProteinID:
XP_004305816
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Position
LG6:26375946..26377970
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AA seq
674 aa
AA seq
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MGRPMGCGTLVVLLVLVFLLIGHGNNRSTSSRTSLRSTSTSERYYGVKMVNTSNTIVLDN
GLVRLTFSNPTGHVTGIKYGGIDNLLEIHNKPTNRGYWDLNWNYPGQKSRTSIFEGILGT
EFRVITSAEDQVEISFTRTYNVSLPQGVTVPFNMDKRYILQRGRSGFYAYAIFERLEGWP
EAKVDQIRMVFKLQQAKFRYMALSDTRQRFMPTAYERGIYGIKLAYKEAVLLNNTGEVDD
KYQYTIEDKDNKVHGWICTDEKSPVGFWMITPTDEFKMAGPFKQGLTSHVGPTTLSVFVS
SHYAGNVSMNFQQGEAWKKVFGPVFIYLNSAHQGSKNSISSLWSNAKQQMLEEVKSWPYN
FTESRDFLSSDQRGSLSSRLLIYDQYISHQPLHSARFAYVGLAPPGEVGSWQRESKGYQF
WTQADNKGHFIIKNVLPGNYSLYASVPGIIGDYKYEADITIEQGSKIQMPDFIYEPPRNG
PTLWEIGIPDRTAAEFYIPDPYPTLSNKLYIVSERFRQYGLWARYEDRYPDSDLVYKVGV
HNYSNDWFYAQVTRDIGNGTYVGTTWQIQFELESATHPGNFTLRLALASGSYSKLLVRIN
NLNTKQPHFATGRIGVDNAIARHGIHGLYSLFSVSVPSSLLHQGTNTIYLTQPKGESPFT
GIMYDYIRLEGPPV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccaatgggttgtgggacactagtggtgctgctggttttagtttttctcctg
ataggtcatggaaacaatagaagtacctcatcaagaacatcacttcggagcactagcact
tctgaacgatattatggggtgaagatggtgaatacatccaacaccattgtgttggataat
ggccttgtccgactaactttctccaatcccaccggacacgttaccggaatcaaatacggt
ggaatagataacttgcttgagatccacaataagccaactaatagagggtactgggatttg
aactggaactacccagggcagaagagcagaactagtatctttgaaggaatattgggcaca
gaatttcgtgtgattacatctgcagaagaccaagtagaaatctctttcaccagaacatac
aatgtgtcccttccccagggtgtgacagtgccctttaatatggacaaaaggtacatattg
cagcgtggtcgttctggcttctatgcatacgccatttttgaacgcttagaagggtggccg
gaagccaaggttgatcaaataagaatggttttcaagcttcaacaagccaagttcagatac
atggcgctatcggatactaggcaaaggttcatgccaacagcctatgaacgtggaatttat
ggtatcaaactcgcatataaagaagcggttctcctaaacaacacaggagaggtagatgac
aagtatcagtacacgattgaggacaaggataacaaagtccatggttggatttgcactgat
gagaagtcacctgttgggttttggatgatcacaccaactgatgagttcaaaatggccggt
cccttcaagcaaggcctcacttcccacgttggtccaactactctctctgtgtttgttagt
agccattacgctgggaatgtttcgatgaacttccaacaaggtgaggcatggaagaaggtt
ttcggcccggtttttatctatcttaactctgctcatcaaggctcaaagaattccatcagt
agtctttggagcaatgctaaacaacagatgttagaagaagtcaagagctggccatacaat
tttactgagtctcgagacttcctttcttctgatcaaaggggatcactgtctagccgatta
ctgatatatgatcagtacatcagtcatcagcctcttcattcagcacgtttcgcttatgta
ggacttgcaccacctggagaagttggatcatggcaaagggaaagcaagggataccagttc
tggactcaagctgacaacaagggtcacttcatcatcaaaaatgtcctgcccggaaattac
agtttgtatgcatccgttccaggcatcattggagactacaaatatgaggctgacataaca
attgaacaaggaagcaaaatccaaatgcctgattttatctatgaacctccaagaaatggt
cctactttgtgggaaattggcatccctgatcgcactgctgccgagttctacatacctgat
ccatatccaactctctcaaataagttgtacattgtttcagaaaggtttcggcaatatgga
ttgtgggcacgttatgaagatcgataccctgactctgatctggtctacaaagttggtgtt
cacaattacagtaacgattggttttatgctcaagtgaccagggatataggaaatgggacc
tatgtaggaactacatggcagattcagtttgaacttgaaagtgcgactcatcccggaaat
tttacactccgattggcattggcctcaggcagttattcaaaactgctggttcggattaat
aacttgaacaccaagcaaccacattttgcaacaggtagaataggtgtggacaatgctata
gcaagacatggaattcatggcttgtactcgttgttcagtgttagtgtaccaagttctctg
ctgcaccaaggaacaaacacaatctatcttacacagccaaaaggtgaatcacccttcaca
ggaatcatgtatgactacataagactagaaggacccccagtataa
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