Fragaria vesca (woodland strawberry): 101309944
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Entry
101309944 CDS
T02666
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
fve
Fragaria vesca (woodland strawberry)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
zf-CCHC
ResIII
AAA_30
CMS1
ERCC3_RAD25_C
zf-CCHC_2
YgbB
Cas3-like_C_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
101309944
NCBI-ProteinID:
XP_004302309
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Position
LG6:complement(3861681..3866811)
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AA seq
772 aa
AA seq
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MTSIIGVSSIYYQTPCELYKRAAAPLAAATTATTTATSSRSGGVSLAFPERQRGHFNTVL
RARSVFATQAIATPNSVLSEEAFKGLGGFSKEELDSESEYESESEVAEPAVGSKDELALS
KLGLPQRLVDSLERRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKRLT
EDDEQRGSRRSGYLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSALS
RGVDVVVGTPGRLIDLINGGSLKLSEVQYLVLDEADQMLAVGFEDDVETILQRLPAQRQS
MLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYALSTTNSSKRTILSDLIT
VYAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVA
TDVASRGLDIPNVDLIIHYELPNDSETFVHRSGRTGRAGKLGNAVLMFTNNQRRTVKTLE
RDVGCRFEFVTPPTVEEVLESSASHVVATLNGVHPESIKFFTPTAQKLIEEQGTTALAAA
LAQLSGFSRPPSSRSLISHEPGWTTLQIIRDPEFARGYLSARSVTGFLSDVYSAAADEVG
KIYLIADERVQGAVFDLPEEIAKELLKRQMPPGNSISKISKLPPLQDDGPVSDNYGRFSA
RDRSSRRGGFSGGRGGGGGRGGFRSSSRGGWGGGRDFSDGDDDFRSSRGSFNRSSSSSSR
PRMTRSMDDDWLIGGTRTGRIPSRDRSFGGSCFNCGQSGHRASECPSKKQGY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgacttctatcattggagtttcgtctatatattaccagactccatgtgagctgtacaaa
agagctgccgctcctctagcagccgccacaacggcgacgacgacggcgacgagcagtagg
agcggcggagtttcgttggcgtttccggagaggcagagggggcacttcaacacggtgttg
agagcgaggagtgttttcgcgactcaggcgattgcgacgcccaactctgtgctcagtgag
gaggccttcaaggggcttggtgggttttcaaaggaggagctagactcggagtcggagtat
gagtcggagagtgaagtggcggagccggcggtggggagtaaagacgagctggctctttcg
aaattgggcttgcctcagcggcttgtggatagccttgagagacgtggcatttcttcgctt
tttcccattcagagagctgtgctagtgcctgcactggaaggtagagacattatagctcgt
gcaaagaccgggactgggaagacattggccttcgggattcccatacttaaacgcctaaca
gaagatgatgaacagagaggttcaaggcggtctggttatcttcctcgagttctggtcctt
gcacctactcgggagttggcaaagcaagtggagaaggagattaaagagtctgcaccttat
ctgaacactgtttgtgtctatggaggagtctcctacgtaacacaacagagtgctctttcg
cgaggggttgatgtagtggttggaactcctggtcggcttattgacctgataaacggtggc
agcctcaagttgagtgaagttcagtatttggtacttgatgaagctgatcagatgcttgct
gttggatttgaggatgatgtggaaacaattttacaaagacttccagctcagaggcagagc
atgcttttttctgcaactatgccaacttgggtgaaaaagctagcacggaaatatttagac
aatccattgacgattgatttggttggtgatcaagacgagaaacttgcagaagggatcaaa
ctctacgctctatcaaccactaactcttcaaagcggactattcttagtgatcttataaca
gtttatgccaagggtgggaagaccattgtttttacccaaaccaaacgtgatgctgatgaa
gtgtcaatgtcattaacgactagcatagcttctgaggcattgcatggagatatatcacaa
catcaaagggagagaaccctaaatggttttcggcaaggaaaattcacagtgctcgttgcc
actgatgttgcatcccgtggacttgatattcccaacgttgacttgattatccactatgaa
cttcccaatgattcagagacatttgtacatcgctctggtcgtactggacgtgcagggaaa
ctcggaaatgccgttctgatgtttactaataaccagaggagaacagtcaaaactcttgag
cgtgatgtggggtgcaggtttgagtttgttactccgccaacagttgaagaggttttggag
tcatctgcttcacatgtggttgctactctcaatggggttcatcctgagtctattaagttc
ttcacaccaacagcacagaaactgattgaagaacagggaacaactgctcttgctgctgca
ctggcacagctaagtggattttcccgacctccgtcatcccggtctctaatcagtcacgag
ccggggtggacaacattgcaaataattcgggatccagagtttgccagaggttacctgtct
gctagatctgtcactgggtttctttcagatgtttattctgcagctgctgatgaagttgga
aaaatatatttaattgcagatgaaagggttcaaggagcagtttttgatcttccagaggag
attgcaaaagagttgttgaagaggcaaatgcctcctggaaacagtatttccaagataagc
aagttgcctccactgcaagatgacggtccagtgagtgacaactatggcaggttttcagct
agggacaggagtagtcgacggggaggttttagtggtggacggggaggtggtggtggaagg
ggaggttttagaagcagctctaggggtggatggggaggtggccgagattttagtgatggt
gatgatgattttaggagtagccgaggaagttttaatagaagtagcagcagcagcagccga
ccacggatgacaagaagtatggatgatgattggcttataggaggtacacgaacaggcaga
ataccatcccgagacagaagctttggaggttcctgtttcaactgtgggcagtctgggcac
agagcatcagagtgcccttctaagaaacaaggatattag
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