Fragaria vesca (woodland strawberry): 101310107
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Entry
101310107 CDS
T02666
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101310107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101310107
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101310107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
101310107
NCBI-ProteinID:
XP_004296398
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Position
LG4:complement(673578..676591)
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AA seq
469 aa
AA seq
DB search
MDSDQGKLFIGGISWETSEDKLKEYFSNYGDVLQTVVMRDKITQRPRGFGFVVFVDPAVL
DRVLQEKHTIDGRTVEAKRALSREEQQTSVRAGNPNPGRNVGSGGNVRTKKIFVGGLPPT
LNEEEFREYFEAYGHVTDVVVMFDQNTGRPRGFGFISFDTEDAVDRVLHKTFHDLSGKQV
EVKRALPKDANPGGGGRSMGGGQGGGGASGGGYQGYGTSGGNPNAYDGRMDSNRYMQSQS
TGGGFPPYGSSGYSAPSYGYAPSSNGIGYGGYGGYGGTNTGYGGPAAAAYGNPNAPNAGY
GGGPPGAPRSSWSSQAPAGYGGMGYGNTAPWGVQSGSAAAGGGGPGSAPAGQSPSAAAGY
GAQGYGYGGYSGGDASYGNPSAYGAVGGRSGSVPNNNVGGPGGEQGSGGGYIGSGYGDSN
GNAGYGNSGWRADPSQASGNYGGQANGAHGGQVGYGGYSSAQARQAQQQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggattcggatcaggggaagcttttcatcggcgggatatcgtgggagacgtcggaggat
aagctgaaggagtacttcagcaattacggcgacgttttgcagacggtggttatgagagac
aagatcactcagagacccagaggttttgggttcgtcgtctttgtggatcctgctgttctt
gatagggttcttcaggagaagcataccatcgatggcaggacggttgaagctaagagggcc
ctctcaagagaggagcagcaaacttctgtcagagcaggaaatcccaatcctggtagaaat
gtgggaagcggtggaaatgttaggaccaagaagatatttgttggtgggctgcctcccact
ctaaatgaagaagagttccgtgaatattttgaagcttatggccatgtaacagatgtagtt
gtaatgtttgaccaaaatactggacgacctcgtggatttggatttatttcatttgacact
gaagatgcagtagatagggttttgcacaagacatttcatgatttaagtggtaagcaagtg
gaagtaaagagggctcttcccaaagatgccaaccctggtggtggtggccgttccatgggg
ggtggtcagggtggcggtggtgcatctggtggtggttaccaaggctatggaacatctggt
gggaacccaaatgcatatgatggtcgaatggactcgaacaggtacatgcaatctcagagc
actggtggtggttttcctccttatggttcttcggggtatagtgcacccagttatgggtat
gctccttccagtaatggcattggttatggaggctatggaggttatggtggtaccaatact
ggatatggtggtccagccgctgccgcctatggaaaccctaatgccccaaatgctggttat
ggtggtggcccaccaggtgctcctagaagttcatggagctcccaagcacccgcaggatat
ggtggtatgggatacggcaataccgctccttggggtgttcaaagcggcagtgcagctgca
ggaggtggtggtcctggatctgcacctgctggtcaatctcctagtgcagcggctgggtac
ggagctcaaggttatggttatggtgggtacagtggaggtgatgcatcctatggaaatcca
tctgcatatggtgcagttggagggcgttctgggagtgtcccaaataacaatgttggtggt
cctggtggggagcaaggtagtggtggtggatacatcggaagtggctatggcgactcaaat
ggaaatgcaggttatggaaattctggttggagagcagacccatcacaagcttctggaaac
tatggtggtcaggctaatggcgctcatggcgggcaagttggctatggtgggtatagcagt
gctcaggcacgacaagcccagcagcagtaa
DBGET
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