Fragaria vesca (woodland strawberry): 101310132
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Entry
101310132 CDS
T02666
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
fve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101310132
03460 Fanconi anemia pathway
101310132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101310132
03400 DNA repair and recombination proteins [BR:
fve03400
]
101310132
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101310132
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101310132
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
101310132
Bloom's syndrome complex (BTR)
101310132
FA (Fanconi anemia) pathway
101310132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
101310132
NCBI-ProteinID:
XP_004301498
LinkDB
All DBs
Position
LG5:complement(16096066..16106701)
Genome browser
AA seq
1228 aa
AA seq
DB search
MNRGESQMSRTHSGRAAAAGVDDTTPFKLGLLEHLRALDNFSNPTQLLSSHFLFSLPTQK
PLNHQAGMATSSMAFPIQHIQRLESAQVQKAWHALSNLKVSSRNYTRPGKTVEVKNASAE
FNHDVGRTAVVSSWCINKSSIPMQTHQYIDESNAKLSEAATCLRSGLRSSNDNVADAGIS
LSGKSQFTESLVIKSHSQMSGGSFSNNFVHTSQPKECLNKLVNEMDDDDDDDDSILENID
VDHIVEQYQSSCTPKPSISKLPPLTPSIHTERQEATCLPPELCTNCVHGFMIGVCQEAAN
HLQELKDRLITISNELLDDVNELSPEQIEKLRQDRLQLNKQIQALERYLCTNTLDEERRK
SHFSLSTTTPSAFRYETPQAPLFRTDPMRFDSEVHSHNKAGGYAEWNSSSVSSSSTDKFG
FSSFPVEREPYIPKFVDVNYIEGSNDNKWRDSPFPWTKELEAKNKRVFGNHSFRLNQREV
INATMSGRDVFVLMPTGGGKSLTYQLPAVICPGLTLVISPLVSLIQDQIMHLFQANIPAA
YLSANMEWSEQQEILREVSSEYCKYKLLYVTPEKVAKSDFLLRKLESLNARQLLSRIVID
EAHCVSQWGHDFRPDYQALGILKQKFPDTPVLALTATATASVKEDVVQALGLVNCIVFRQ
SFNRPNLWYSVIPKTKKCIEDIDKFIKDNHYDESGIIYCLSRMDCEKVAEKLQECGHKAA
FYHGSMDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC
GRAGRDGQRASCVLYYSYSDYIRVKHMISQGVIEQSTLTPGQNRMNTANSGRILETNTEN
LLRMVSYCENDVDCRRLLQLIHFGEKFDCTTCNKTCDNCLKIKSFIEKDVTEIAKQLVEL
VKSAGQQCSSAHILEVYRGSFSQFVKKHGHHTLSLHGAGKHLPKGEASRVLRHLVTEDLL
VEEVKKSDIYGSVSSILKVNEFKACELFSGRKTVMLRFPSSIKASKQWNSEATSTKGSLA
SGKLRTQQLGTRQPQSNGDVDLSTQLFVSLKMLRDTIVREAGDGVMAYHIFGNKQLKDMS
AIIPRTMQELEEINGINKGKVMKYGDRVLETIESTIKDYYKTYKNSSSSNDSSEGKRKRE
GNKDQNRHVEDDDFTKSTDRSKKRASKRQSKPIEDYSYQEPDSNQIMDDDLDVYGYNFEV
NASATKTVQNVGGRVLPQWSTHGNGRQR
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaggagaatcacagatgagtcgtacccattccggcagagctgctgctgctggt
gttgatgacaccacgcctttcaaactcggtttattggagcatctgagagcacttgacaat
ttctcaaacccaactcaacttctcagctcacatttccttttctccttaccaacacaaaaa
ccacttaatcaccaagctggaatggctactagctcaatggccttcccaatccagcatatt
caaagattagagagtgcgcaagttcaaaaggcttggcatgcgctttccaatcttaaggta
tcttctaggaattacacaagacctggaaaaaccgtcgaagttaaaaatgctagcgctgag
tttaatcatgatgtgggaagaactgcagttgtaagctcatggtgcattaataaaagtagc
atccctatgcaaacacatcaatacatcgatgaaagcaatgccaagttaagtgaagccgca
acctgtctgcgcagtgggttgcggtcaagtaacgataatgttgcagatgcaggaataagt
ctttcggggaaaagtcagttcacagaatcactggtcatcaaatctcattctcagatgtca
ggtggttcatttagcaataacttcgttcataccagccaaccgaaagaatgtttgaataaa
ttggtgaatgagatggatgatgatgatgatgatgacgacagcatacttgagaatattgat
gttgaccacatagtggaacagtaccaatcaagttgcacacctaaaccatcaatttccaag
cttccacctcttactccatctatacacacagagagacaagaagcgacttgtttgccacca
gaactgtgtacaaattgtgttcatggatttatgataggagtttgccaagaagctgcaaat
catttgcaagaattgaaggacaggctaattaccatatcaaatgaactgcttgatgatgtc
aatgagctcagtccagagcaaatagagaagcttcgccaagataggttgcagctcaacaag
cagattcaggcacttgagagatatctctgtaccaacacattggatgaggaaagacggaag
tcacatttttccttatccacaacaactcccagtgctttccgatatgaaacacctcaagca
cccctattcaggactgaccccatgagatttgattcagaggtccattcacataacaaggct
ggaggatatgcagaatggaattcatcatcagtttcatcctcttctacggataagtttggt
ttctcatcttttcctgtggagagggaaccttacatcccaaagtttgttgatgttaactat
attgaaggttcaaatgacaataagtggagagacagtcctttcccatggactaaagagctg
gaggctaagaacaagagagtgtttggtaaccactctttccgcctcaaccaaagagaggtc
atcaatgctacaatgagtggccgtgatgtttttgttttaatgccaactggtgggggtaag
agcctgacatatcagcttcctgctgtaatttgtccaggcttaactttggtaatctctcct
ctcgtgtcgcttattcaagatcaaataatgcacttatttcaggcaaatattcctgctgct
tacctaagtgccaatatggagtggagtgaacaacaggagatccttagagaagtgagttct
gaatattgtaaatacaagctgttatatgtcacccctgaaaaagttgccaaaagtgatttt
ctgttgcggaaattggagagtttaaacgctcgtcagttgctttctaggattgtaattgat
gaagctcattgtgtgagtcagtgggggcatgatttccgaccagattatcaggctcttggt
atcttgaagcagaagttcccagatactccagtgttggctttaacagctacagcaacagct
agtgtaaaagaagatgttgtgcaagctcttggtcttgtaaactgtattgttttccggcaa
agtttcaatcgcccaaatctatggtattctgttattcccaagacaaagaaatgcatagaa
gatattgacaagttcattaaagataatcactatgatgaaagtggaataatatattgtcta
tcaagaatggactgtgaaaaagttgctgaaaaattacaggaatgtgggcataaagcagca
ttttaccatggtagtatggatcctgctcaacgtgcctttgtccagaaacagtggagtaaa
gatgaaatcaacattatctgtgctacagtggcatttggaatgggtataaacaagcctgat
gtgcgctttgtaattcatcattctcttcccaagtctattgaaggctatcatcaggaatgt
ggtcgagctggtagagatggccaacgtgcatcttgtgtgttgtattacagttatagtgac
tatatacgagtcaaacatatgattagccaaggagttatagagcaaagcacattgacaccg
ggacaaaatcgtatgaatacagctaattctgggagaatactggaaacaaatactgagaat
cttttgcgcatggtgagttattgtgaaaatgatgttgattgccgaaggcttctacaactt
attcattttggagaaaaatttgattgtaccacctgcaataagacgtgcgataattgttta
aagatcaagagtttcattgagaaggatgtcacggagatagcaaagcaactggtcgaactg
gtgaaatcagcagggcagcagtgttcatcagctcatatattagaagtctacaggggctcc
ttcagccaatttgtcaagaaacatgggcatcatactttgagtctgcatggagcaggaaaa
catctacccaagggagaagcttcgcgtgtattacgccatcttgttaccgaggacctgctt
gtagaagaagtcaagaaaagtgatatttatggatctgtatcatcaattctaaaggttaat
gagttcaaagcatgcgaacttttctctggcaggaaaacagtcatgttaagattcccttcc
tctataaaagcttcaaagcagtggaactctgaagcgacttctactaaaggttcactggct
tctgggaagctaaggactcagcaacttggcaccagacaacctcagtccaatggagatgtg
gatctctctacccaattatttgtttctttgaaaatgcttcgagatactatcgtaagggaa
gctggggatggggttatggcataccacatattcgggaataagcagttgaaagatatgagc
gccataattcccagaacgatgcaggaacttgaggaaatcaatgggattaacaagggtaag
gtgatgaagtatggagatcgggtactcgaaaccattgaatctaccatcaaggattactac
aagacatacaaaaacagcagcagtagcaatgacagtagtgagggcaagagaaaaagagaa
ggtaacaaagatcaaaataggcatgtagaggatgatgacttcaccaaaagcactgatcga
tcaaagaaaagggcctcaaaaaggcagagcaaacctattgaagactacagttatcaggag
ccggattccaaccaaatcatggatgatgatctagatgtgtatggttataattttgaagtg
aatgcttcagctacaaagactgttcaaaacgttggtggaagagtgcttccccaatggtcg
acacatggaaatgggcgacaacgataa
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integrated database retrieval system
