Fragaria vesca (woodland strawberry): 101310507
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Entry
101310507 CDS
T02666
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101310507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101310507
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101310507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
101310507
NCBI-ProteinID:
XP_004297722
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Position
LG4:complement(22481656..22486657)
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AA seq
319 aa
AA seq
DB search
MANRSQSLSINVPYGGPSVSGPSIAGAQGNKDRKMASAEHLVLDLSNPDLRENALLELSK
NKELFQDLAPFVWKSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDMGLDYICTTAERFFAVGRVLGNMVAALAEQP
SSRLLKHIIRCYLRLSENPRACDALRSCLPDMLRDATFSTFLVEDATTRKWLQLLLQNVG
GSRLPSLQAGGGFDHMMLN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcggtcccagtctctttcaattaatgtgccatatggaggtccaagcgtttcg
ggaccaagcatcgctggagctcaaggaaacaaggatcggaaaatggcatcagcggagcac
ttggtgcttgacctaagtaatccagatcttagagaaaatgcgcttcttgaactctctaag
aacaaggagttatttcaagatttggctcctttcgtgtggaaatcttttggtactattgct
gcactcatacaggagatagtttcaatataccctgttctatctccaccaaatctgactccg
gcacagtcaaatcgagtttgcaatgctcttgctcttcttcagtgcgtggcttcccatcca
gatacaaggatgctgttcctcaatgctcatatacctttatatttgtatcctttcctcaat
acaacgagcaagtcaaggccatttgagtacttgaggcttacaagtttaggtgtcatcggt
gccttagtcaaggttgatgatacagaagttattagtttccttctgtcaacagaaataatt
ccactgtgccttcgtaccatggaaatggggagtgaactctcaaaaacagttgccacgttt
attgttcaaaagattttgttggatgatatgggcttggattatatttgtacaacagcagag
cggttttttgcagttggtcgggtgttagggaacatggttgcagcacttgctgagcaacca
tcatcacgcctactgaaacatataattcgatgttatcttcgattgtctgaaaacccaaga
gcttgtgatgctttaagaagttgtcttccggatatgttaagagatgctacttttagtact
ttccttgttgaagatgcaactactaggaagtggctgcaattgttgctccaaaatgttgga
gggagccggcttccttcgctacaagctgggggaggttttgatcacatgatgctgaactaa
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