Fragaria vesca (woodland strawberry): 101310581
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Entry
101310581 CDS
T02666
Name
(RefSeq) probable beta-1,3-galactosyltransferase 20
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fve01003
]
101310581
Glycosyltransferases [BR:
fve01003
]
O-Glycan biosynthesis
O-linked Gal type
101310581
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
101310581
NCBI-ProteinID:
XP_004293514
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Position
LG3:2856267..2861980
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AA seq
679 aa
AA seq
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MKRLKGEPPVTRRFKLQHLLIGMAALYLVFISFKFPQFLEIAKALSGDDGYDDMANEDSD
LSKPMFNSVYKDTLHRKLEDDQHQDAPVRPRKEPLEEKRNGSKTIKPLQHRYGRITGEIM
KRRNRTNELSVFERMADEAWTLGLRAWEELDKLDVKETGDSSIVEGKPESCPSWLSMSGE
ELATGDRLMFLPCGLAAGSSITLVGTSHNAHQEYVPQLAKLRRSNGMVMVSQFMVELQGL
KSVDGEDPPKILHLNPRLRGDWSQRPVIEHNTCYRMQWGSAQRCDGSPSKNSEEMLVDGY
ARCEKWMGNDMVAAKESKTKTTSWFKRFIGREQKPEVTWPFPFVEGRLFILTIRAGVDGF
HMSVGGRHVTSFPYRTGFTLEDATGLAIKGDVDVHSVYVTSLPASHPSFSPQRVLELSEK
WKAHPLPKTPIRLFVGVLSATNHFAERMAVRKTWMQSSAIKSSRVVVRFFVALNARKEVN
AVLKKEAAYFGDIVILPFMDRYELVVLKTISICEFGVQNVTAAYIMKCDDDTFVRLDTVL
KEIEGISSKKSLYMGNLNLLHRPLRSGKWAVTYEEWPEEVYPPYANGPGYIISIDIAKFI
ASEHGNRSLRLFKMEDVSMGMWVEQFNSSRVAVQYSHNWKFCQYGCMENYYTAHYQSPRQ
MVCLWDKLARGRAQCCNFR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggctgaaaggtgagcctccggttactaggaggttcaagttgcagcatttgttg
attggtatggcagcattgtacttggttttcatatcctttaagtttccccagtttcttgag
atagcgaaggcgttgagtggtgatgatggttatgatgacatggccaatgaggactcggat
ttgagtaaaccgatgtttaattctgtttataaggatacattgcaccgaaaattggaagat
gaccaacatcaggatgcgcccgtgaggcctagaaaggagcctttggaagagaagagaaat
ggttccaagactataaagccacttcagcatcgatatggtcggataactggtgaaatcatg
aagcggaggaatagaacaaatgaactctcggtgtttgagaggatggcagatgaggcttgg
acattaggattacgtgcttgggaagaactggataaacttgatgtcaaggagacaggagat
agttctatagttgaggggaaacccgagtcatgcccttcatggttatccatgagtggggaa
gaattggcaacgggagatagattgatgttccttccttgcgggcttgctgcaggttcttct
attacactggtgggaacttcccataatgctcatcaggagtatgtgcctcagcttgcaaaa
ttgaggaggagtaatggaatggtaatggtctcgcagttcatggttgagttgcaaggattg
aagtcagtggatggggaggacccccccaagatcctgcacttgaatccacgattaagagga
gattggagtcagcggccagtcattgagcacaacacctgttataggatgcagtggggatca
gctcaaaggtgtgacggttcaccatccaagaacagtgaagaaatgctagttgatggatat
gcgcgatgtgaaaagtggatgggaaatgatatggtagcagcaaaggaatccaagacgaag
actacctcatggtttaagcgttttatagggcgtgagcagaagccagaagttacttggccc
tttccctttgtggagggtagattatttatcctgacaatacgagctggtgtagatggattc
cacatgagtgttggtggcaggcatgtgacgtcatttccatatcggacgggatttacactt
gaagatgcaactggattagcaataaaaggagacgtggatgttcattctgtatatgttacc
tcgcttcctgcttctcatccaagtttctcacctcaaagggtactggagttgtcagaaaag
tggaaagctcatcctttacctaagactcctattcgactgttcgttggggttctttctgca
acaaatcactttgcagagcgcatggcagtgaggaaaacttggatgcaatcatcagcaatc
aagtcctcacgcgtagtagtccgtttctttgtcgcgttgaatgcaaggaaggaagtcaat
gcagtgctgaagaaagaggctgcttactttggtgatattgtgatcttgccctttatggat
cgttacgagcttgttgttctcaagaccatttctatttgtgaatttggggttcagaatgtg
acggcagcatacatcatgaaatgtgatgatgatacatttgttagattggacactgttttg
aaggaaattgagggaatctcttctaaaaagtctctttatatgggcaatctcaacctcttg
catcgccctctcagaagtgggaaatgggctgtaacctatgaggagtggccagaagaagtt
tatcctccatatgctaatggccctggatacataatttctattgatattgctaaattcatt
gcctctgagcatgggaatcgaagcctacggctttttaagatggaagatgtgagcatggga
atgtgggttgagcaatttaacagttccagggtggctgtccagtactcccataactggaaa
ttttgtcagtatgggtgtatggagaactattacacagcgcattaccagtctccaagacaa
atggtctgtctgtgggacaagttggctaggggtagagctcaatgctgcaacttcagatga
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