Fragaria vesca (woodland strawberry): 101310604
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Entry
101310604 CDS
T02666
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101310604
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101310604
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101310604
NCBI-ProteinID:
XP_004298448
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Position
LG4:complement(18253083..18254778)
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AA seq
443 aa
AA seq
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MVVNRSGSIFLVLLLLSSVAAIVSGQNDTVELEDEYWKQRAADAMRIANASVHPDPENVT
EEFNAKVHEHIMGQNRTRRTLRGFKRYEGPCRATNPIDACWRCDPEWADNRQKLVDCSMG
FGKKTTGGKGGPIYVVTDGSDDDIVNPKEGTLRYAVTRKRPLWIIFAHSMVIRLQQELMV
TCDKTIDGRGANIVIAYGGGITLQYVNNVIITNIKVKDIQSLPGGMLRDAEDHVGLRTRS
DGDGISLFSASNIWIDHVSMARTADGLIDCIMGSTAVTISNGHFTDHNEAMLFGAKNTHT
QDKNMQITLAFNHFGQGLVQRMPRCRFGFFHVVNNDYTQWIMYAIGGNMNPTIISQGNRF
IAPESHVAKEVTKREYTDESEWKNWNWRSEGDVMENGAFFVESGNPNCAKSTNIEMMPFK
PGKLAPQLTSFAGALECFVGRPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcaatagatccggttcaatctttctcgtcttacttttgttgtcgagcgtcgcg
gcaatcgtcagcggccaaaatgatactgtggaattagaagacgagtactggaaacaaaga
gcagccgacgccatgagaattgccaatgcttctgttcatcccgatcccgagaacgttaca
gaggagttcaatgccaaagtacacgagcatatcatggggcaaaataggacgagaaggacc
ttgagaggcttcaagagatatgaaggcccctgcagggccaccaacccaatcgacgcatgc
tggcggtgcgaccctgaatgggccgacaaccgccagaaactcgtcgattgctctatgggt
ttcggaaaaaagactaccggtggcaagggtgggccgatttacgtcgtcactgatggctca
gatgacgatatcgtaaaccctaaagaagggaccctccgctacgcggtgacacggaaacgt
cctctctggataatctttgcccatagcatggtgattaggctgcaacaggagctaatggtg
acatgtgacaagaccatcgatggtagaggagccaacattgtgattgcctatggtggtggc
ataactctccaatatgtgaataatgtcatcattaccaacattaaagttaaggacattcag
tccttaccaggtggtatgctcagggacgccgaagaccatgttggtctgaggaccaggagc
gatggtgatggcatctccctcttcagcgcttccaacatctggatcgaccacgtttccatg
gcgaggaccgccgacggactcatcgactgcatcatgggttctaccgctgtgaccatctcc
aatggccacttcactgaccacaacgaggcgatgttgttcggggcaaaaaatacccacacc
caagacaagaacatgcaaataacgctcgccttcaaccacttcgggcagggattggttcag
agaatgccaaggtgcagatttggattcttccatgttgtgaacaatgactacacacagtgg
ataatgtatgctattggtggtaacatgaaccctaccatcatcagccagggtaacaggttc
attgctcctgaaagccatgtcgcaaaagaggtgaccaagagggagtacacagacgaatcg
gaatggaagaactggaactggagatccgagggagacgtgatggagaatggagcattcttc
gttgagtctggcaaccctaactgtgcgaaatcaacgaacatagaaatgatgccgtttaag
cccgggaagttggcgccgcaactgaccagctttgccggcgctctagagtgctttgttggc
cgaccatgctag
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