Fragaria vesca (woodland strawberry): 101310655
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Entry
101310655 CDS
T02666
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101310655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101310655
Spliceosome [BR:
fve03041
]
Complex C
Other components
Step II factors
101310655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
Motif
Other DBs
NCBI-GeneID:
101310655
NCBI-ProteinID:
XP_004289940
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Position
LG2:6160550..6164006
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AA seq
540 aa
AA seq
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MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKTDPDYTKSWYDRGAKIGQADKYRKGACQNCGAMSHDVKSCMERPRKVGAKY
TNKHIAPDEKVETFELDYDGKRDRWNGYDASSYALVIERYESRDEARRKFLKEQQLKKLE
EKNNNQNGEEAVSEEDEEEAEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVR
NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYAGDNRYRNSGQAMEFK
QLNIHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKENLKSHTKETILEKYGNAASEEAI
PRELLLGQSEREVEYDRAGRIIKGQETTLPRSKYEEDVYINNHTCVWGSWWKDHQWGYRC
CQQFTRNSYCTGAAGIEAAEAATDLMKANIARKEAVGEMPPPAEEKRPATWGTDIPEDLV
LDEKLLAEALKKEDARRKEERDERKRKYNVRWNDDVTAEDMEAYRMKKVHHDDPMKEFLN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgtcagtggcattcaaatcaagggaagatcatcgtaagcaaattgaattg
gaagaagcccgaaaggctgggctcgcaccagctgagctcgatgaggatggaaaggagatc
aatcctcatattcctcagtatatgtcctctgcaccttggtatctcaatgctgaaagacct
agcttgaaacatcaaaggaaatggaaaacagatccagattacacaaaatcgtggtacgac
agaggtgcaaagattggccaggctgataaatataggaagggtgcatgccagaattgtgga
gctatgtcacatgatgtcaagtcttgtatggaaagacccaggaaagtgggagcaaagtat
acaaacaaacacattgctcctgatgagaaggtagagacttttgagctcgactatgatgga
aaacgggaccgctggaatggatatgatgcatcatcttatgctctagtcatcgagagatac
gaatcaagagatgaagcacgaaggaaattcttaaaagaacaacaacttaaaaaattggag
gagaaaaataataaccaaaatggtgaagaagcagttagtgaagaggacgaagaggaggct
gaggacgaggatgatctgagggtggatgaagccaaggttgatgagagcaaacaaatggac
tttgcaaaggtggagaagcgtgttcgtacaacaggtggtgggagcacaggaactgtcagg
aatttgcgtattcgtgaggatactgcaaaatatcttttaaaccttgacgtcaactctgca
cattatgatcccaaaacccgttccatgcgtgaggatcctcttccagatgctgatccaaat
gagaaattttacgcgggtgataacagatatagaaatagtggtcaagctatggagttcaag
cagttgaacattcatgcctgggaagcatttgacaagggacaagacattcacatgcaagca
gccccatcccaggctgaattactgtataagaactataaggtaattaaggagaatttgaag
tcgcacacaaaggagaccattttagagaagtatggcaacgcagctagtgaagaagcgatt
cctagggagcttttactgggacaaagtgaaagagaagtcgaatatgatcgtgctggaagg
attatcaaaggacaggaaaccacacttcccagaagcaagtatgaagaagatgtttatatc
aacaaccacacctgtgtatggggttcatggtggaaggatcatcaatggggatacagatgt
tgtcagcagtttactcgaaacagctattgcacaggtgctgctggaatagaggctgccgag
gctgcaactgatctgatgaaggctaacattgctcgtaaagaggctgttggagaaatgcct
cctcctgcggaggagaaaagacctgccacttggggaactgacatcccagaagatctggtt
ttagatgagaaattacttgctgaagctcttaaaaaagaggatgcaagaaggaaagaagag
agagatgagagaaaacgcaaatacaatgtcagatggaatgatgacgttactgctgaggat
atggaggcatacaggatgaagaaagttcaccatgatgatccaatgaaggagtttctgaac
tga
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