Fragaria vesca (woodland strawberry): 101310799
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Entry
101310799 CDS
T02666
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101310799
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
Other 90S particles
101310799
Pre-60S particles
Other pre-60S particles
101310799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
101310799
NCBI-ProteinID:
XP_004299857
LinkDB
All DBs
Position
LG5:complement(15088281..15092507)
Genome browser
AA seq
501 aa
AA seq
DB search
MISAISWVPKGVSKPVPAVAEPPTQEEIDELIKSGILDKSGGGGSDEDNEGEMEVEETTG
EGGQVSHALEVAKALGRAEKVTKSGSKYDDITEGLKELDMDHYDDEDDDGIDLFSGGFGD
LYYPSNDMDPYLKKEKDDDEDSEDSEDMTIRPNDSVIVCARNEDDISQLEIWLYTETEDG
ESDVYVHHDIIISAFPLCTAWLDCPLKGGDRGNFIAVGLMGEPTIEIWDLDIIDEVQPCV
VLGGIAEKKKKKGKKTSIKYKEDSHTDSVLGLAWNKEYRNILASASADKQVKIWDVATGK
CNITMEHHTDKVQAVAWNHFSPQVLLSGSFDHSIVLKDGRVPTHSGYKWTVTADVESLAW
DPHTEHSFVVSLEDGTVQGFDIRAATSAPTSESKPSFTLHAHNKAVCGISYNPLAPNLLA
TGSTDKMVKLWDLSNNQPSCIASMNPKAGAVFSISFSQDNPFLLAMGGSKGKLEVWDTSY
DAAVAQRFGKYIKKSRPQSAA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcaatttcctgggtgcccaaaggagtttcaaagcccgtccccgcagtcgcc
gagccgcccacccaggaagaaatcgatgagttgattaagtctggtatcttagacaaaagt
ggaggcggtgggagcgatgaggataatgagggagaaatggaggttgaagaaaccaccggt
gagggtggccaagtctcacatgcattagaggtggcaaaagcacttggcagagctgagaag
gtgaccaaatcaggaagcaagtatgatgacattacggaagggttgaaggaacttgacatg
gatcattatgacgacgaggatgatgatggcattgatttgttcagtggtgggtttggggac
ctttactacccaagtaacgatatggatccatatctcaagaaggaaaaagatgatgatgag
gattctgaagatagtgaggacatgaccatcagaccaaatgactcagtcatagtttgtgct
cgcaatgaggatgatatcagtcagctcgagatttggctatatactgaaacagaggatggt
gaatcagatgtttatgttcaccatgacataatcatttcagcatttcccctctgcacggca
tggcttgactgtcctctcaaaggtggagacagaggaaattttatagctgttggtttgatg
ggggaacctaccattgagatatgggatcttgacattattgatgaagtgcaaccatgtgtg
gtattgggcggtattgctgagaagaagaaaaagaaaggaaaaaagacctcaattaaatac
aaagaagacagtcacacagattcagttctggggcttgcttggaataaagagtacagaaat
atactggccagtgcaagtgctgacaaacaagttaaaatttgggatgtggctaccggaaaa
tgtaacattactatggagcatcatacagacaaggttcaggcggttgcgtggaatcatttt
tcccctcaagttcttctcagtggatcttttgatcattcaatagtcctgaaagatggaagg
gtaccaacacattccggttataagtggacagtgacagctgatgtagaaagcttagcatgg
gatccgcatactgagcattcatttgtggtgagtcttgaagatggtacagtacaaggtttt
gatattcgggctgccacttctgctcctacttctgaatctaaacccagttttactcttcat
gcacacaacaaagctgtttgtggaatatcctataatcctttggcacctaatcttcttgca
accggatccacagataaaatggtgaagctttgggatttgtcaaataatcaaccttcatgc
attgcatccatgaatcctaaagcaggagctgtgttttctatttctttctcccaagataac
ccctttttgttggccatgggaggctcgaaagggaaattggaagtatgggatacatcatat
gatgctgcagttgcccaaagatttggaaaatacatcaagaagagcagaccccagtctgct
gcttga
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