Fragaria vesca (woodland strawberry): 101311357
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Entry
101311357 CDS
T02666
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101311357
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101311357
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101311357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101311357
NCBI-ProteinID:
XP_004292874
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All DBs
Position
LG2:complement(22281942..22285017)
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AA seq
723 aa
AA seq
DB search
MRGNRTSMELKKDKLVRFYNDEKQDGNFPWEKSDITQKHLKEPLPGDRAKKTLRFGGFKV
FPENHQPHEKKILDPGSDIFLTWNRIFLMSCLVSLFVDPLFFYLPSVHNDGSSSCMDTDL
NLGIVVTCFRTVADMFYLLHMFIKSRTAYISPKTRVFGRGELVMDPKKIVRRYLRTDFFI
DLLAALPLPQIVIWFIIPAVKNSTAGHANHALVLIVLLQYVPRLYLIFPLSSQIIKATGV
VTKTAWAGAAYNLVLYMLASHVLGASWYLLSIERHATCWKSECGKEIDPIKCFLSYLDCG
ALNNDERQQWINSTHVFSNCNPDNPIDFKYGIFQNALANNVVSSAFVEKYLYCLWWGLQN
LSSYGQNLTTSTFIGETSFAILIAIVGLVLFAHLIGNMQTYLQSMTVRLEEWRLRRRDTE
EWMRHRQLPEDLQERVRRFVQYKWLATRGVDEESILHALPTDLRRDIQRHLCLDLVRRVP
FFSQMDGQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFN
SITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVRSLDEVEAFALRAEDLKFVANQFRRL
HSKKLQHTFRFYSYHWRTWAACFIQVAWRRFKKRLLAKNLSLAESFSSNCDNQEADEAEQ
EKEYSRTNTASNASQARQNLGVTILASRFAANTRRGAQKMKEVQLPKLQKPEEPDFSVEP
EDD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtaacagaacaagcatggagttgaagaaagataagctagtgaggttttataat
gatgagaaacaggatggtaattttccctgggaaaagagtgacattacccaaaaacacttg
aaagagccactgcctggtgatagagctaagaagactcttagatttggggggtttaaggtt
ttcccagagaaccatcagccacatgagaagaaaattcttgatcctggaagtgatatcttc
ttgacatggaacaggatttttcttatgtcttgcttggtatcgctgttcgttgatccgctg
tttttctaccttccttcagtacataatgatggcagttcatcttgtatggatactgatttg
aatttgggaattgttgtcacatgttttcgtactgttgctgatatgttctatctgctgcat
atgttcatcaagtcgaggacagcttatatatcaccaaaaactagagtttttgggaggggt
gagcttgttatggatcctaaaaagattgttagaaggtatttgagaacagatttcttcata
gatcttttagctgcgctgcctctccctcagattgtcatatggttcatcatacctgcggtt
aaaaactccactgctggccatgccaatcatgccctagtactgattgttctcctccaatat
gttcctagattgtatctcattttcccactaagttctcagattatcaaagcaactggtgta
gtcacaaagacagcttgggcgggggctgcgtataatctcgtactctacatgttagctagt
catgtcttaggtgcttcatggtacctattatcaatcgaacgacatgcaacttgctggaag
tctgaatgcggaaaggaaattgaccccatcaagtgtttcctcagctacttggattgtggt
gctttgaacaatgatgaacgccagcaatggataaacagcactcacgtgtttagtaactgc
aacccggataatcccatcgatttcaaatatggcatatttcagaatgcactggccaacaat
gtagtctcctcagcatttgttgagaagtacttgtattgtctatggtggggattacagaac
ttgagttcctatggtcagaatttgactacaagcacattcattggggaaacttcttttgcc
atactcattgctattgtgggtcttgttctgtttgcacacttgattggaaatatgcagacc
tacttgcaatctatgactgtgagacttgaggagtggaggctcaggcggcgagacacagag
gaatggatgagacataggcaactccctgaagatctgcaagaacgtgttaggcgatttgtg
cagtacaagtggcttgcaactcgaggagttgatgaggaatcaatcttacacgccttgcct
acagatcttcgtcgagacattcaacgtcacctatgtttagaccttgttcgacgtgtccca
tttttctcacagatggatggtcaactacttgatgcaatatgcgagcgtttagtatcctct
ttgagtactcaaggcacctacattgtccgtgaaggtgaccctgtcacagagatgttattc
attatccgaggaaagctagagagctcgacaacaaatggaggccggacaggtttcttcaac
tcaattactttgagacctggtgatttttgtggcgaagaattgcttgcttgggcattgctt
cccaaatctactctcaatttgccttcttctacaagaacagttagatcacttgatgaagta
gaggcctttgcacttagagcagaagatctcaagtttgttgccaatcagtttcgacgactt
catagcaagaagttgcaacacacatttcgattctactcttaccactggagaacttgggct
gcatgcttcattcaggttgcgtggcgtcgattcaagaagagattgttggcaaagaacctt
agcttggccgagtcattttcatcgaactgtgacaaccaagaggctgatgaggcagagcaa
gaaaaggagtactctaggactaatacagcttcaaatgcttcgcaagcgagacagaatttg
ggggtcaccattttggcctcgaggtttgctgcaaacacgagaagaggagctcagaaaatg
aaggaggttcaattgccaaagttgcaaaagcctgaagaaccagacttctcagtagaacca
gaagatgactag
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