Fragaria vesca (woodland strawberry): 101311606
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Entry
101311606 CDS
T02666
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101311606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101311606
03029 Mitochondrial biogenesis [BR:
fve03029
]
101311606
Membrane trafficking [BR:
fve04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101311606
Atg1 complex
101311606
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101311606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101311606
NCBI-ProteinID:
XP_004306587
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Position
LG7:complement(2450886..2454987)
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AA seq
628 aa
AA seq
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MASSHGNTHSEAEIKEQIITEFYAKSLQIILESRTPYMSSRNYSGEQGLSSPSSSSSSSS
SVRPRDKWFNLALRECPAALENLVIWRQSNFEPMVVDVVLVQRPVGSDSVESSPKRNLSL
KERYPNCWNYEQEDFWCEAKSEKIIERWVLHYDTRRTRETKSGSRRSSNSTLQMLYKKSI
LLLRSLYVTLRLLPAYKIYRDLNSSGQILPFTLAHRVASFAEPFTCREDAEMQRFEFTPV
DTACGRLCLSVLYCSSLSDVSSEPSTPMSPQVIPDYVGSPLADPLKRFPSLPVSGSLSRA
TPSSSPFSRRHSWSYDHGADSPPSISFSPSPTHSEPHASISHPRSRHFPPTSLPRYQPGT
SLDHKKDIGFYEYYPSPGFSPALSPSATPSLPISIPGNHVSNNPVRSESAPFSAPVAKHA
SSPASSQKLNFPPSPPLRSTKTTVGTAVEKLLSFGKGESRQCSGLKISSSSSQQISFSRS
STRSFPDDFDDSEYPCPFDYDDDVTDPGSRPESFDQRHEPGGLFPITKSQDAAVGALVRM
LKKAPPLQQEVSDSVSLSQDCRPEIWSDIKQEANLSSERPAPGHPAHSSSVISSGLVTSK
TTADALEELRGYRDMKNLLLAQSTKFHT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatctcatggtaatactcactctgaggctgaaattaaggaacaaataatcact
gaattctatgctaaaagtttacaaattattctcgagtcgaggactccttacatgtcctcc
agaaattatagtggggaacaaggcttgtcatcgccttcatcttcctcttcgtcctcctcg
agtgtgaggcccagggataagtggtttaatttagctctaagagaatgccctgctgcgctg
gagaatcttgttatctggcgccagagcaattttgaacctatggtggttgatgtggttttg
gtccagagaccagttggtagtgattcggtggagagttcgcctaagaggaacttgtcattg
aaagagcggtatccgaattgttggaattatgagcaggaagatttttggtgtgaggcaaag
agtgaaaagattatagagagatgggtactgcattatgatactcgtaggactagagaaaca
aaatcagggagcaggaggtcaagcaatagtactttacagatgttgtataagaaatcgata
ttactgttgaggtcattgtatgttactcttaggcttttacctgcttataaaatttatcgc
gatctcaactcgtctggccaaattcttccatttactctggctcaccgggtggcctctttt
gctgagcccttcacatgtagagaagatgcagaaatgcagcggtttgagtttacccctgtg
gatactgcttgtggtaggctttgcctttcagtgttgtactgttcatcgctttcagatgta
agctctgagccatcaactcctatgtctccccaagttataccagactatgttgggagccca
ttggcagacccacttaaaaggttcccatcccttcctgtgtcaggatcattatcacgtgcc
actccatcatcatctccattctctaggcgtcatagttggagttatgaccatggtgcagat
tcaccaccttcaatttccttctcaccttcgccaacacattcagaacctcatgcttcaatt
tcccacccacgatctcgccatttcccacccacaagcttaccacgttatcagcctggaaca
tctcttgatcataagaaggatataggtttttatgagtattatccttcacctggcttttct
cctgcactgtccccatcagccactccatcattgccaatctctattcctggcaatcatgtt
tcaaataatccggtacggtctgagagtgcaccattcagtgcccctgtggctaaacatgct
agttcccctgcatcatcccagaagctaaactttcctccatctcccccccttaggagtact
aaaactacggttgggacagctgttgaaaagttactctcttttgggaaaggggagtctaga
caatgttctgggcttaagatttcatcaagcagctcgcagcagatatccttttctagaagc
tccactaggtcttttcctgatgattttgatgattcggagtatccttgcccatttgattat
gatgatgatgtgacagatcccggtagcagacccgaatcctttgaccaaaggcatgagcct
ggaggattatttccaattacgaaatcccaagatgctgctgttggtgcgcttgtaagaatg
ctaaaaaaagccccacctcttcagcaagaggtctctgattcagtaagtttgtcacaggac
tgcaggcctgaaatatggagcgatattaaacaagaggccaatctctcttctgagagaccc
gcaccaggtcaccctgctcattcctcaagtgttatatcttcagggctcgtaacatcaaaa
actacagctgatgccttagaagagctccggggttacagggatatgaaaaacttgttactg
gcgcaaagtactaagtttcatacgtag
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