Fragaria vesca (woodland strawberry): 101311638
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Entry
101311638 CDS
T02666
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101311638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101311638
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101311638
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
101311638
NCBI-ProteinID:
XP_004290569
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Position
LG2:15262426..15267015
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AA seq
364 aa
AA seq
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MVGKENLKTEDLNLLFEKLMMIGGGQVKMEGRVITDWKDIPMELLLQILTLVDDRTVITA
SGVCRGWRDAICLGLTRLSLSWCNKNMNNLVLSLAPKFTRLQTLILRQDKPQLEDNAVES
IANFCHDLQVLDLSKSFKLTDRSLYALAHGCPNLMRLNISGCSAFSDIALEYLAGFCPKM
KVLNLCGCSRAASDRALQAIGRYCSELQCLNLGWCEEVGDVGVMSLAYGCPDLRTVDLCG
CVQITDDSVVALANKCPHLRSLGLYYCQNITDKAMYSLAQSLAAMWETRKSKNDEEGLKT
LNISQCTALTPDAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVQAHRAAAAYP
HSAH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggttgggaaagaaaacctcaagactgaagacttgaacctgttgtttgagaagctgatg
atgattggtggtggccaagtgaaaatggaagggagggttattactgattggaaggatatt
ccgatggagcttttgctgcagattctgacacttgtggatgatcggacggtgatcacagct
tctggagtctgtcgtggttggagagatgctatttgcttgggcctcactcggctctccctc
tcatggtgtaacaagaacatgaacaacttggtcctatctcttgctcctaagtttacaagg
ttgcaaactctaatactacgtcaggataaaccccaacttgaagacaatgctgttgaaagc
attgcaaacttctgtcatgatctgcaggtcctggaccttagcaaaagcttcaagctcact
gatcgctccctgtatgccttagctcatgggtgtcctaatcttatgagactcaacatcagc
ggttgttctgcattcagtgacattgctcttgaatatctggctggcttttgcccaaaaatg
aaagtattaaatctgtgtggatgttccagggctgcatcagatagggcattgcaggctatt
gggcgttactgcagtgagttgcagtgtctgaatcttggttggtgtgaggaagtcggtgat
gtcggagttatgagtttggcatatggatgccctgacctaagaactgtcgacttgtgcggc
tgtgtccaaataacagatgacagtgtggttgctttggcaaacaaatgccctcatctgaga
tccctcggcctttactattgtcaaaacattacagacaaggcaatgtactctttggcccag
agtcttgccgcaatgtgggaaaccaggaaaagcaagaacgatgaggaagggctcaagact
ctcaatatcagccagtgcacagccctcacccctgatgctgttcaggcagtgtgcgactcc
tttccatcacttcatacctgctctggaaggcactctctcatcatgagtggctgtttgaac
ttgacatctgtgcattgtgcatgtgctgtccaggcgcaccgcgctgctgctgcctaccct
cactcagctcattga
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