Fragaria vesca (woodland strawberry): 101311656
Help
Entry
101311656 CDS
T02666
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101311656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101311656
03021 Transcription machinery [BR:
fve03021
]
101311656
Transcription factors [BR:
fve03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
101311656
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101311656
RNA polymerase III system
TFIIIB
101311656
RNA polymerase I system
SL1/TIF-1B
101311656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
101311656
NCBI-ProteinID:
XP_004294942
LinkDB
All DBs
Position
LG3:23277635..23280357
Genome browser
AA seq
207 aa
AA seq
DB search
MAEKGLEETGLEASGSQPVDLKQHPSGIVPTLQNIVSTVNLDCKLDLKTIALRARNAEYN
PKRFAAVIMRIREPKTTALIFASGKMVCTGAKSESQSKLAARKYARIIQKLGFDAKFKDF
KIQNIVGSCDVKFPIRLEGLAYSHNAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT
GAKVRSETYEAFENIYPVLTEFRKNQQ
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagggttggaggaaacagggttggaggcaagcggaagccaaccggttgat
ctcaagcaacatccttccggcatcgtccctactcttcagaatatcgtttccacagtcaat
ttggactgcaaattggatcttaagaccattgcattgcgagctcgtaatgcagaatacaat
cccaagcgttttgcagctgtgattatgagaataagggagccgaaaactactgcattgata
tttgcatctggtaaaatggtttgtacaggagccaagagtgaatcacaatcgaaattggct
gcacggaagtatgctcgaatcattcagaaactaggttttgatgccaagttcaaggatttt
aaaatccagaacatagttggttcctgtgatgttaaattccccataagactcgaaggtctg
gcatattcccacaatgccttttcaagttatgaaccagaactgttccctggcttgatttac
cgaatgaaacaaccaaagattgtgcttcttatctttgtatctggaaaaattgttctcaca
ggagcgaaggtaagaagtgagacatacgaagcctttgagaacatatacccagttcttaca
gaattcaggaaaaaccagcaatga
DBGET
integrated database retrieval system