Fragaria vesca (woodland strawberry): 101311734
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Entry
101311734 CDS
T02666
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101311734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101311734
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101311734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
101311734
NCBI-ProteinID:
XP_004293352
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Position
LG3:complement(984483..989501)
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AA seq
550 aa
AA seq
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MSSDLLLKPSCGGCGSTSDLYGSNCKHMTLCCACGKTMAENKAKCYDCGAVVTRLIREYN
VRASTASEKSYFIGRFVTGLPNFSKKKSAENKWTLRKDLSDPRRSKDKDGQDQKKYKDVR
PPTEASREKLKNKPWVLEDETGQSQYNGQLEGAQSAIYYLLMMQGKEFSAIPAGSWFNFN
KVAQYKQLTLEEAEEKMNNRKKTQDGYERWMMKSGTNGPGPLGEKEPSVASAKGRKKMTG
DDDEGNFSDKGEEDEDEETARKNRLGLNKKGGDDEDDEGGNEDEDLDDDSSEKGDDWEHE
EIFTDDDEAVGINPEEREEFEPEVPAPPEIKQDDDDDDANEGEGGLSKSGKELKKLLGRS
GGLNDSDGEDDDDDDDDMDDDIALPQPLAPKQKDAPKQEPVDNSPVKPGASGSAAKANPS
ASKSSKGKRKSNGDDNKTPNSAPPKKVKTENEQKSVKEEPAPDSTVPAKGTAAPSKPGST
PSGGRTGPVTEEEIRAVLMQKSPITTRDLVNNFPGRLKTKEEKDAFAAILRIMSRIQKNN
GMSYVVLREK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacttgttgctgaagccgtcgtgcggcggttgcggatcgacttccgatttg
tacggaagcaactgtaagcacatgacgctgtgctgcgcgtgcggcaaaaccatggcggag
aataaagccaaatgctacgactgcggcgccgtcgtcactcgcttgattcgagagtataat
gttagggcaagcactgccagcgagaagagctacttcattggtaggtttgtgacggggttg
cccaacttttcgaagaagaagagtgccgaaaacaaatggactcttcggaaggatctttcg
gatccgaggaggagtaaggataaggatggtcaggaccagaagaaatataaggatgttcgg
ccgcctactgaggcatctcgggagaagctcaaaaacaaaccatgggtgttggaggatgaa
actggccagtctcagtacaatggacaacttgaaggtgcacagtcagcaatctactaccta
ctaatgatgcaaggaaaagagttttctgctattcccgccggttcttggttcaactttaac
aaggttgcacaatataagcaacttactctagaagaagcagaagagaaaatgaacaatagg
aaaaagactcaagatggatatgaaagatggatgatgaaatccggaacaaatggacctggt
ccacttggtgagaaggaacctagtgtggctagtgccaaaggacgcaaaaaaatgactggt
gatgatgatgagggaaacttctctgataaaggggaggaggatgaggatgaagagacagca
aggaaaaatagacttggtctcaacaaaaaaggtggtgatgatgaggatgatgaaggtgga
aatgaagatgaggacctagatgatgatagcagtgagaagggtgatgattgggagcacgaa
gaaatattcactgatgatgatgaagctgttggtataaatcctgaggagagagaagaattc
gaacctgaggttccagctcctccagaaattaagcaggacgatgatgatgatgatgctaat
gaaggggagggtgggctgagcaaatcaggaaaagagttgaagaagctacttgggcgaagt
gggggcctgaatgattcagatggagaggacgatgacgacgacgacgacgatatggatgat
gatattgccttgcctcaaccgctggctccaaagcagaaggatgcacccaaacaggaacca
gttgacaatagtcctgttaaaccaggggcttctggatctgctgctaaagcaaacccatct
gcctccaagtcatctaagggaaagagaaaatcgaatggtgatgataataaaacacccaac
agtgctccacccaagaaagtgaagaccgaaaatgagcaaaaatcagtcaaagaggagcct
gcccctgatagtactgtgcctgcaaaaggtactgctgcaccctcgaaaccgggttcgaca
ccatccggtggtcgtacaggtccggtaactgaggaagaaattagggcagttttgatgcaa
aagtcaccaataaccacacgtgatcttgttaataacttccctggacgactcaaaaccaaa
gaggagaaggatgcttttgcagcaatcctgaggataatgtctaggatacagaagaacaac
gggatgagctatgttgtgttgagggagaagtaa
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