Fragaria vesca (woodland strawberry): 101311790
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Entry
101311790 CDS
T02666
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101311790
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101311790
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
101311790
NCBI-ProteinID:
XP_004287286
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Position
LG1:2854635..2860364
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AA seq
659 aa
AA seq
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MHEPELQDLADDADYAASQQHGSASMMRSDSGRHSSSSEHEGAEVVYVKDNVTIHPSMLA
SERISGRLRLIKQGSSLFMTWIPYKGQNTNARVSEKDRILYTIRGVPLTEVRSIRRHTPA
LGWQYIIIVLATGLAFPPLYFYNGGVKEFLATIKQHVFIVRSAEDANVFLVNDFQNPLQK
TLSSLEIPRALSVGSEPSTSSLVGETSLDEMQERKSEDVQNDYTISQYNERQKQKNHDPA
RDISIQVLEKFSLVTKFARETTSQLFRDGHSNGYGGIQRRSNSLSSIDYSSQKASDDSNK
VSDKSPVPEDPLEFDKNSLVWGKPRQPPLEFDEWRTFLDSEGRITDSEALRKRIFYGGVE
HKLRKEVWPFLLGYHAYDSTYAEREYLKAMKKAEFETVKKQWQSISPEQARRFTKFRERK
GLIDKDVVRTDRSISFYDGDDNPNVNLLHDILLTYSFYNFDLGYCQGMSDLLSPILFVMG
DESESFWCFVKLMERLGPNFNRDQNGMHSQLFAITKLVEMLDSPLHNYFTQRDCLNYFFC
FRWVLIQFKREFEFNKTLRLWEVLWTHYPSEHLHLYVCVAILKRYRSKIIGEQMDFDTLL
KFINELSGQINLDAVVRDAEALCICAGENGDACIPPGTPPSLPVDDGLLYPQQELDEVL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaccggagctccaggacctcgccgacgacgccgattatgcggcgtcgcagcaa
cacggctcggcgagcatgatgcgaagcgatagcggcaggcacagctcgtcgagcgagcac
gaaggcgccgaggtggtttatgtgaaggataatgtgaccatccacccctctatgctcgcg
tcggagaggattagtggacgattaaggctaattaagcagggctcttcactttttatgacg
tggattccgtacaaggggcaaaacaccaatgctagggtttctgagaaagataggattctg
tatactataaggggagtgccgttgacagaggttcggtccattcggcgccacactcctgca
cttggatggcagtacattatcatcgttttggcaactggacttgcttttccccctctgtac
ttctacaatggaggagtcaaggagttccttgctacaataaagcagcatgtgttcattgtg
aggtcagctgaggatgctaatgtatttcttgtgaatgattttcaaaatcctctgcagaaa
actctatcatctttggagataccgagggcgctttctgttggaagtgagccatctacatct
tccttagttggcgagacgtctctagatgaaatgcaggagagaaaaagtgaggatgtccaa
aatgattatacaatttctcaatataatgagaggcaaaagcaaaagaatcatgatcctgca
cgagatatctcaattcaagtgctggagaagttttctcttgtgacaaaatttgctcgagaa
acaacttcgcaactcttccgtgatggccatagtaatggatatggaggtatacaaaggaga
agtaatagcctgtcttccattgattactcctctcaaaaggcatctgatgattcaaacaaa
gtctctgataaaagtccagtccccgaggatccactggagtttgacaagaattcactggta
tggggaaaaccacgacagcctcctttggagtttgatgagtggcgcaccttcttggattct
gaagggcggatcacggattcagaagctttaagaaagagaatattttatgggggagttgag
cacaaactacggaaagaggtctggccattcttgctgggataccatgcatatgattcaaca
tacgcagagagggagtatctcaaggcaatgaagaaagcagagtttgagacagtaaagaag
cagtggcagagtatctccccagagcaggcaagaaggtttacaaaattccgagagagaaaa
ggccttattgacaaagatgtggtgaggaccgacagatctatctccttctacgatggggat
gataatccaaatgtgaatctgttgcatgatatattgttaacatactcgttttacaacttc
gatcttggttactgtcagggtatgagtgatcttctgtccccaatattgtttgtaatgggg
gatgagtcggaatcattttggtgttttgttaaactgatggagcgccttgggcccaatttt
aaccgtgaccaaaatggcatgcactctcaactttttgccataactaagttggtggagatg
ttagatagccccttgcataattactttacacagcgtgactgcttgaattacttcttttgt
ttccgctgggttctgatacagtttaaaagggaatttgaattcaacaagacactgagatta
tgggaggtactgtggacacattatccatctgagcacctccacctatatgtgtgcgttgcg
atactcaagcgataccgtagtaagataattggggagcagatggacttcgacactctactg
aagttcatcaatgagctgagtggtcagataaatcttgatgccgttgtgagagatgcagaa
gctctgtgcatatgtgctggtgagaatggtgatgcttgcattccacctggaactccgccc
tcactacctgttgatgatggtttgttgtaccctcaacaagaactagatgaggtattgtaa
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