Fragaria vesca (woodland strawberry): 101311858
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Entry
101311858 CDS
T02666
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101311858
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101311858
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101311858
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101311858
Spliceosome [BR:
fve03041
]
Common components
Common spliceosomal components
SR proteins
101311858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101311858
NCBI-ProteinID:
XP_004298819
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All DBs
Position
LG5:complement(1653989..1657608)
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AA seq
222 aa
AA seq
DB search
MPYTRVKRSVSPQTSVSPVKGRQSRSLSRSRRSRSRSPSVDASNPGNNLYVTGLSTRVTS
ADVEKFFNKEGKVLDCHLVTDPRSRESRGFAFVTMETVEDAERCIKYLNRSVLEGRLVTV
EKAKRKRGRTPTPGRYQGLRDKRDAGRDRGDRDYGDRGDRDYGDRNRDRDRDRRRSRSYS
PRRRQDREPPSRERRGRSRSPPARERRMDEHSDSYRRRRDHS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacacgagagtgaaaaggtctgtttcaccgcagacctctgtctcacctgtcaaa
gggcgtcaatcgagatcattgtccaggtctagaagaagtcgttctaggagcccatctgtg
gatgctagcaatcctggaaacaacttgtatgtaacgggcttatccacaagggttacctct
gctgatgttgagaaattttttaacaaagaaggcaaggtgttggattgccatcttgtaact
gaccctcgctcaagagaatctcgtggatttgcatttgtcacaatggaaactgtagaggat
gctgagcgatgtatcaagtacttgaatcgttctgtgcttgaaggtcgactggtcactgtg
gaaaaggcgaagaggaagcgagggaggacaccaactccaggaagataccaaggcttgaga
gataaacgagatgcaggacgtgatcgtggagatcgtgattatggtgatcgtggagatcgt
gattatggtgatcgcaaccgtgatcgtgatcgtgatcgtagaagatctcgcagctattct
cctcgtaggcggcaagacagagagcctccatccagggagcgccgaggaaggtcacgttct
ccaccagccagggagcggaggatggatgagcattcagactcatacagaaggcgcagggat
cactcctga
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