Fragaria vesca (woodland strawberry): 101311900
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Entry
101311900 CDS
T02666
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101311900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101311900
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101311900
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
101311900
NCBI-ProteinID:
XP_004306665
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Position
LG7:3501305..3503679
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AA seq
649 aa
AA seq
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MEEEDGGKVRVLIEKATESIEPEVNPRLLKAIKAVVRRSDSELRLAAHLLMDLMKRDHSQ
VRYLTLLIIDELFMRSKLFRCIVVENMDQLLTLSVGFRRNLPLPAPANVAATLRLKAIEF
LEKWNASYGVHYRQIRLGFDYLKNTLKFQFPNLQANAARVQQERRERERKSKEILVKKFQ
SLEGSFGSIKEEIQSTVDEIGECLEIACAKEEHSKFIPLDDEEDFEEIHSYELRQLRLQT
LEEEDKVHENTENKVVFDALRELYKLLLTKHLVAVQEWITVLVRVELNDNRSRDSYLKEF
IDIRNQIQSVKKKCEESGCTLLNTVNPDGEDIWEEGNVGSVETGSSSRPSNNIEDLAGTS
TSTSNEVKERSSKADGNVTNAKKIRSREGGVAKLDPLKSKLLAEAPEVNWGSYLDNWGSK
RDVLANQRGLELESHWGRVDQDAVIPAEKIAELNLQATVYKEKQVDIPPCRAPLRNGKLC
QRKDLRVCPFHGSIIPRDDEGKPLNQNPSKDETTQDTGANLVEQLAKQAVKNVREKDKDL
ARKREIDKLALKRAKLAKVREHNDMVLRDAAMASTSRSAAIGEDLEAANSTNPSSRNKKK
TLAAMLKKKETPKDRLAQRLLNTRASAATVRQLTLGADTNYREAFPNQW
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagacggagggaaggttagggttttgatcgagaaggcgacggaatcgatc
gagccagaggtcaacccgcgcctcctcaaggccatcaaggccgtcgtccgccgctccgat
tccgagctccgactcgccgctcatcttctcatggatctcatgaagcgcgaccactctcag
gtgaggtatttgacattgttgataattgatgagctttttatgcggtcgaagctgtttaga
tgcattgtggttgagaatatggatcagttgttgacgttaagcgtcgggttcaggaggaat
ttgccactgccagctccggcaaatgttgcggcgactctgcgtttgaaggcgattgagttt
ttggagaagtggaatgcttcatatggggttcattatcggcagattcggttagggtttgac
taccttaagaacacgcttaagtttcagttcccgaatctacaggcaaatgcagcgcgggtt
cagcaggagaggagggaaagggagaggaagtcgaaagagatcttggtgaagaagtttcag
agtctggaggggagttttggatcgataaaggaagagatacagtcgacggttgatgagatt
ggggagtgtttagaaattgcatgtgctaaagaggaacattcgaagtttattccattagat
gatgaagaagattttgaagagattcattcttatgaattacggcagttgcgtttgcaaacg
ttggaggaagaagataaagttcatgagaatactgaaaacaaagtggtttttgatgcactg
agggagctttacaagcttttgttaaccaagcatttggttgcagtccaagaatggattact
gttcttgtgagggtcgaactcaatgataacaggtccagagattcctatttgaaagagttc
attgatatccggaatcaaattcaatcggtgaaaaagaagtgcgaagaatcaggttgcact
cttctaaacactgtgaatcctgatggagaagatatttgggaagaaggcaatgtcggatca
gttgagactgggagttctagtcgtcccagtaacaacattgaagatcttgctgggacatca
acatccacatctaatgaggtaaaagagagaagttctaaagcagatggtaatgtgacgaat
gctaaaaaaatccgcagtcgtgaaggtggtgtagccaagttagaccctctgaagagtaag
cttttggctgaagctccagaggtgaattggggctcttacttggataactggggttcaaag
agggatgtattggctaaccagcgggggttggagcttgaaagtcattggggcagagtggat
caggatgcagttatcccagcagaaaagattgcagagttaaatcttcaggctactgtatac
aaagaaaagcaagttgatattccaccatgccgagctccattacgtaatggaaaactttgt
cagagaaaagacttgagagtttgtccgtttcatggatctattattcccagagatgatgag
gggaagcctctcaatcaaaacccttctaaagatgagacaactcaggatacaggggccaat
ttagtagagcagttggcaaaacaagctgtgaagaatgttcgcgagaaagataaagattta
gcaaggaagagagaaattgataaactagcactgaagcgtgcaaagcttgcgaaagtacga
gaacacaatgatatggttttacgtgatgctgctatggcttctacttctagatctgcagct
attggagaagatttggaggcagctaatagcacgaacccatcatccaggaacaaaaagaaa
acccttgcagccatgctgaagaagaaagagacaccaaaagatagattagctcagagactt
ttaaacacacgagcgagcgctgccactgtaagacagctcaccttgggggcggatacaaat
tacagagaagccttcccaaatcagtggtga
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