Fragaria vesca (woodland strawberry): 101312018
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Entry
101312018 CDS
T02666
Name
(RefSeq) serine/threonine-protein kinase rio2-like
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101312018
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fve01001
]
101312018
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101312018
Enzymes [BR:
fve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101312018
Protein kinases [BR:
fve01001
]
Serine/threonine kinases: Other
RIO family [OT]
101312018
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-40S particles
Kinases
101312018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
APH
ABC1
OspG_kinase
Kdo
Pkinase
TCAD9
Motif
Other DBs
NCBI-GeneID:
101312018
NCBI-ProteinID:
XP_004309818
LinkDB
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Position
Un
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AA seq
435 aa
AA seq
DB search
MKLDVDVLRYLTKEDFRVLTAVEMGMRNHEVVPSELVERIAALKHGGTYKVMKNLLKHKL
LHHDASKYDGFRLTYLGYDFLAIKTLVNRGVFSAVGRQLGVGKESDIFEVATEDGTVMAM
KLHRLGRTSFRAVKSKRDYLKHRSSFNWLYLSHLAALREFSFMKALEEHGFPVPNAIDCN
RHCVIMSLVPGYPLVQVKQLENPEIVFNTIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKS
TMIDFPQMVSVSHRNAQMYFDRDVECVFKFFSKRFNMSFHECTADIDGSAVDTDDSGRPS
FTSVAKDTGFLDKELSASGFTKKDQEEISKFIEGGIKKDASSDDEDTEDDEYISMLNEAN
TIGVDSLHMVDQERYSETVNNDYDVELVKRLNKVRQNAVTVARGGQKTFASRNAYKDKGG
KSSNSSKVQRQLSSW
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggatgtggatgtgttgagatacctcacgaaagaggattttagggtattaact
gctgtcgaaatgggaatgagaaatcatgaagttgtaccctctgaacttgtggagcgtata
gctgcactcaagcatggtggcacttataaagttatgaaaaatttgctcaagcataagctc
ttgcaccacgacgcctctaaatatgatgggtttcggctaacatatctcggttatgatttt
cttgcaattaagactttggtcaaccgcggagtcttttcagccgttggtcgtcaacttggt
gttggaaaagagtctgatatttttgaggtggccaccgaagatggtacagtgatggccatg
aagttgcacaggcttggtagaacttctttcagggctgtcaagtctaagcgtgattaccta
aaacaccgtagcagtttcaattggctatacttgtcccatcttgcagcactcagagaattt
tcttttatgaaggctttagaagagcatggttttcctgttccaaatgctatagattgtaac
aggcattgtgtgattatgtcactagtacctggctacccacttgtgcaggtgaagcagttg
gaaaatcccgagatagttttcaatactatcattgggctcgttgttcgtctggcagaacat
ggtttgattcactgtgacttcaatgagtttaacattatgattgatgatgatgagaagagc
accatgattgattttccacaaatggtctctgtatcacaccgtaatgctcaaatgtacttt
gaccgtgatgtggaatgtgtctttaagtttttcagtaagaggttcaatatgtctttccat
gaatgcacagctgatattgatggctcagcggtagacacagatgatagtggcaggccttct
tttacttcagtagcgaaggatactggttttcttgacaaggaactttctgccagcgggttt
actaaaaaggaccaggaagaaatttctaagtttattgaaggagggatcaagaaggatgct
agttctgatgatgaagatactgaagatgacgaatacatctctatgttaaatgaagcaaac
acaatcggtgttgattcgctacatatggtagatcaggagagatacagtgagacggttaat
aacgactatgatgttgagctggtaaaacgattgaacaaggtgaggcaaaatgctgtaaca
gtagcccgtggaggacaaaaaacttttgcatccagaaacgcctacaaagacaagggtggt
aaatcctctaacagttccaaagtccaaagacaattaagtagctggtga
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