Fragaria vesca (woodland strawberry): 101312171
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Entry
101312171 CDS
T02666
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00061
Fatty acid biosynthesis
fve00071
Fatty acid degradation
fve01100
Metabolic pathways
fve01212
Fatty acid metabolism
fve04146
Peroxisome
Module
fve_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101312171
00071 Fatty acid degradation
101312171
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101312171
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fve01004
]
101312171
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101312171
Enzymes [BR:
fve01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101312171
Lipid biosynthesis proteins [BR:
fve01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101312171
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of breast milk
101312171
Exosomal proteins of breast cancer cells
101312171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
DUF6032
YmiC
Motif
Other DBs
NCBI-GeneID:
101312171
NCBI-ProteinID:
XP_004303579
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All DBs
Position
LG6:complement(22676361..22680453)
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AA seq
729 aa
AA seq
DB search
MEHTEGSVMNSQVKQNLGAGDYLSILKGYGTFGILGAVIVAVLIPVLLSTVFLGKKRKHR
GVPVQVGGEEGYAMRNVRVTDLIESPDSEATTVPALFEKSCNKFAQNQFLGTRKLIGREF
VTASNGKKFEKLHLGDYEWQTYKQVFDRASNFASGLIKLGHNVDTRAAIFADTCAEWFIA
FQGCFRQNITVVTIYSSLGDDALIHSLNETQVSTLICETKQLKKLAAISSSLTSIKNVVY
FDDEGSSDAKECESTSNWTVKSISEVEKLGQETPVHPRLPSKNNVAVIMYTSGSTGLPKG
VMITHGNIVATTAAVMTVIPHLGGTDTYLAYLPLAHVFELAAESVMMASGVKVGYGSALT
LTDTSNKIKKGTKGDVSVLKPTLMTTVPAIIDRIRDAVFKKVEEKGGIAKKLFDIGFKRR
LPAVEGSWFGAWGLEKLFWDNLVFKVIRLGLGGRLRFMLCGGAPLSADSQRFINICMGAP
IGQAYGLTETFAGATFSEADDTTVGRVGPPLPCCYVKLVSWKEGGYLPSDRPMPRGEIVI
GGPSVTAGYFNNQEKTDEVYKVDENGMRWFYTGDIGMFHPDGCLEIIDRKKDIVKLQHGE
YISLGKVEAALINSNYVDNIMVFADPFHNYCVAIVVPARGALEQWAQQAGIKYNDFSELC
AKGEAVSEVQQSLSKIAKEAKLDKFELPGKIYLAPEPWTPESGLVTAALKIKREQIKAKF
KSEIEKLYG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggagcatactgaagggagcgtcatgaactcacaggtaaaacaaaatttgggtgctggt
gattacttgtcaattctgaaaggctatggaacctttgggatattgggtgctgttattgtt
gccgtgcttatacccgtgttgctgtcaactgtgttcttgggaaagaagaggaagcaccga
ggagttcctgtgcaagtcggtggtgaggaaggttatgcgatgcgcaatgttcgtgttact
gacttgattgagtctcctgatagcgaggccacaactgtgccagccttgtttgagaaatct
tgtaacaagttcgcgcagaatcagtttcttggaaccaggaagttgatcgggagggaattt
gtcacggctagcaatggcaagaagtttgagaaacttcatttgggagattatgaatggcaa
acatacaaacaagtatttgatcgggctagcaactttgcgtctggccttattaagttgggt
cataatgtggatacccgtgctgcaatttttgctgacacctgcgcggagtggtttatagcc
tttcaggggtgcttccggcagaatattactgttgttactatctattcttcgctaggtgac
gatgccctaatccactcgctgaatgagactcaagtatcaacattgatatgtgaaacaaag
cagttgaaaaagctggctgccataagctcaagcctaaccagcattaaaaatgtagtttat
tttgacgacgagggaagttcagatgctaaagaatgtgaaagtactagcaattggacagtc
aaatccatttctgaagttgagaaacttggacaagaaactcctgttcatccacgtttacct
tcaaagaacaatgtcgctgttatcatgtatacgagcggcagtacaggtctaccaaaggga
gtaatgataactcatggcaatatcgtagccactactgcagctgttatgacagtgattcca
catctgggtggcactgatacatacttagcatacttgcccttagctcatgtttttgaattg
gccgcagagtctgtgatgatggcttcaggtgttaaagttggttatggttccgcattgacg
ttaacagacacttcaaataaaattaagaaaggaaccaagggagacgtttctgtgttgaag
ccgactctcatgactacagttcctgctattatagatcgtattcgagatgcagtctttaaa
aaggttgaggagaaaggggggatagcaaagaaactttttgacattggatttaaacggcga
ctgcctgctgtagaaggaagctggtttggcgcttggggtctggaaaaattgttttgggat
aaccttgtctttaaagttatacgtctagggcttggaggccgcctccgctttatgctctgt
ggtggagctcctttatctgctgattcacaacgcttcatcaatatctgcatgggggctcca
atcgggcaggcatatggcttgacggaaacatttgctggagctacgttttctgaggcggat
gacacaacagtgggccgtgttggcccacccttgccttgttgctacgtcaagcttgtttct
tggaaagaaggtggatacttgccatctgacaggccaatgcctcgtggggagattgtaatt
gggggacctagtgtaactgctgggtacttcaataatcaagagaagactgacgaggtgtac
aaggttgacgagaatggcatgcgctggttttatactggtgacattggaatgttccatcct
gatggatgcctcgaaattatagataggaaaaaggatattgttaaacttcagcatggagag
tacatctcactcggaaaggttgaggcggcattaataaacagtaattatgtggacaatatc
atggtatttgcagaccccttccacaactactgtgtagctatcgttgtccctgcgcgtgga
gccctggagcagtgggctcagcaagctgggatcaagtacaatgatttttctgagctgtgt
gcaaaaggtgaagcagttagtgaggtccagcaatccctctccaagatagcaaaagaagca
aaactggacaagttcgaacttcctggaaagatttatttggctcctgagccatggacaccc
gaatctgggttggttactgctgctctcaagatcaagagggaacagatcaaggccaagttc
aaaagtgagattgaaaagttgtatggttga
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