Fragaria vesca (woodland strawberry): 101312178
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Entry
101312178 CDS
T02666
Name
(RefSeq) uncharacterized LOC101312178
KO
K08518
syntaxin-binding protein 5
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101312178
Membrane trafficking [BR:
fve04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101312178
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
101312178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Synaptobrevin
WDR55
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR19_1st
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
101312178
NCBI-ProteinID:
XP_004305125
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All DBs
Position
LG6:7461433..7470208
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AA seq
1122 aa
AA seq
DB search
MFAKRLLHKAVNHHHHSQQNMQQGSLTSADLDLRVAVHYGIPSTSSILAFDPIQRLLAIG
TLDGRIKVIGGGGIEGLLISPKQLPYKYIEFLQNQGYLVSILNDNSIQVWNLEGRCLVCS
LEWESNITAFSVIHGSNLMYVGDEYAVLAVVKYDIEEEKLLQLPYHISADLLSEAAEFPF
PTDQPIVGLLPQPGSSGNRVLIAYQNGLLILWDVSEAQIVFLGGGKDLQLKDGVVKPTDE
VNIDSPENTIEHELGEKEISALCWASSNGSILAVGYVDGDILFWNTSSAASIKGQQVSSS
SNNVVKLRLSSAERRLPVIVLQWCTLNKSHNDCDGQLFIYGGDEIGSDEVLTVLTLDWSS
GMGNLRCVGRTDLTLTGSFADMILLTNSATIAGNHRADAFVLTNPGQLHFYDETSLSSLI
SQQEKKPCVSALEFPVIIPTTNPTMTAAKLIRTATGENSLKDLSEIFSAMNLGSLPTSVD
GTKWPLTGGVPSQLSLSKNSGIERLYLAGYSDGSVRIWNATYPLLSFVCVLEGEVQGIKV
AGLNSPVSRMDFCIFTLNLAVGSESGLVRIYNLKGCSDGIKFLFVTETKCEAHSLSQVKG
PQCRAVFSLTNSRVQALQFVKHGGKLAVGFECGHVAMLDTSSLSILFFIKDASFSSSPVI
SMTWKEITNPQGLLKSTKLSETKSPVHPAEEVLFILTKDANIHLICGNTGNVIIPRPWQL
KKEAIAISMYVIDGRISASKVSDTNPPEETSKDNSTKNESMAGSSPIPINSLDVDQDNNS
ENAYSEERLLNSLILLCCVDSVRLYSTKSVIQGNNEPIRKVKHARPCIWAATLKNVEKTW
GLTLLFQTGEIEIRSIPDLELVKESSLMSILRWNCKANMDKTMSFDDAHITLANGYETVF
ISLLTAENDFRIPESLPCLHDAVLASAADAALSVSLNQKKKQSTGPAILGIVKGLKGGKM
VQSGDSSHSTATPKSRFDQLEGMFWKSQQLDLFPGLDHQETLELNIDDIEIDEPLHVAST
STSHDVDNKKREGDSERDRLFQGGTGDTKPRVRTAEEIKAKYRKTEDASSVASEARNKLM
ERGQKLEKLSRRTEDLQNGAEDFASMTKELVKTLEARKWWHI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaagcgactcctacacaaggccgtcaaccaccaccaccattctcagcagaat
atgcagcaaggcagtttgacgtcagcagacttggacctgcgagttgcagttcactatgga
attccatctacttcttccattcttgctttcgaccccatccagcgtcttctcgccatcggg
acactggatgggaggattaaagtaattggtggtggcggtattgaaggacttcttatatcc
ccaaaacagttgccttacaaatacatcgagtttctacaaaatcagggttacttggtcagc
atcttaaatgataatagcattcaggtttggaatcttgagggcagatgcctagtttgttct
ctagagtgggaatcaaatataactgctttttctgtaatccatggctccaacttaatgtac
gtgggcgatgagtatgctgtattggctgtggtgaagtatgatattgaggaggaaaaactt
ctgcagttgccgtatcatatttctgcggatttgttaagcgaagctgctgagtttccattt
cctaccgaccaaccgatagttggacttcttccacagcctggttcatctggaaatagagta
ctgattgcatatcaaaatgggttgcttatactgtgggatgtttctgaggctcagattgtc
tttcttggaggtggtaaggatctccaactaaaggacggagttgttaagcctactgatgaa
gtcaatattgattctcctgaaaatacaatagaacatgaactgggagagaaagaaataagt
gctctttgttgggcgtcatccaatgggtccattttggctgtgggatatgtagatggagat
attttgttctggaacacgtcatctgctgcttccattaagggtcagcaagtatcgtcatca
tctaataatgttgttaagttacggctatcatcagcagaaagaagactgcctgtcattgtc
ttgcagtggtgcacattaaataaatcccataatgattgtgatggacaactatttatctat
ggtggcgatgaaataggatcagatgaagttctgacggttttaactcttgattggtcatca
gggatggggaatttaaggtgtgttggccgtacagaccttaccctcactggttcgtttgca
gacatgattttattaacaaattctgcaacaattgcgggcaatcatagagctgatgctttt
gtgttaacaaaccctgggcaattgcacttttatgatgaaaccagcctgtcgtccctaata
tcccagcaagaaaagaaaccatgtgtctctgctttggagtttccagtgataattcctact
actaatccaaccatgactgctgccaaacttatcaggacagctactggggagaactcatta
aaggatctatcagagatattctcagctatgaaccttggctcattaccaacttcagttgat
ggtacgaaatggcccttgactggaggtgtgcccagtcagttgtctctttcaaagaatagt
ggtattgagagattatatctagcaggatattcagatggatctgttcggatatggaatgcc
acatatccgctcttatcttttgtctgtgttttagaaggcgaggtgcaaggtataaaagtg
gctggtttaaattctccagtatcaagaatggatttctgcatcttcactttgaacttggct
gttggcagtgaatctggtttggttcgtatttacaacctcaaaggatgttcagatgggata
aaattcctctttgtaaccgaaaccaaatgtgaagcccacagtttgtctcaagtgaaagga
cctcaatgcagagctgttttcagtcttactaattcccgagttcaagcgctacagtttgtc
aagcatggaggtaaacttgcagtgggatttgaatgtggtcatgttgcaatgctggacaca
agttccttatccatattgttcttcataaaagatgcatctttctctagctccccggtcatt
tcaatgacttggaaagaaattacaaatcctcaaggcctcttgaagagtaccaaactctca
gaaacaaaatcacccgttcaccctgcagaggaagtactgttcatcttaaccaaagatgca
aatatacatttgatttgtggaaacactggtaatgtgatcatcccccggccatggcaattg
aaaaaggaagcgattgcaatttcaatgtatgttatagatggaagaatttcagcctctaaa
gtatctgatacaaatccgccggaagagacgtcaaaggataattcaaccaagaacgagtct
atggcaggcagttctccaattcctataaattcacttgatgtggaccaggacaataattca
gaaaatgcatactctgaagaaagattgttgaactcgctgattttgctttgctgtgtggat
tcagtgcgcttgtactccacgaaatctgtgattcagggaaacaatgaacccatacgaaag
gtgaaacatgcaagaccttgcatttgggcagcaactctgaagaatgttgaaaaaacttgg
ggattgactttactgtttcagactggagagattgaaattagatctattcctgatttagaa
ttggtgaaagaaagctccttgatgtcaattctaaggtggaattgtaaggcaaacatggat
aagacaatgagtttcgatgatgcacatatcacactggcaaatgggtatgagacagtattc
atctctctgttaactgctgaaaatgatttcaggattccagagtctttgccttgtctccat
gatgcagttcttgcatctgctgcagatgcggccttaagtgtgtctttgaatcagaagaag
aaacagagtactggcccagcgatattaggtattgtcaaaggcttgaaaggaggaaaaatg
gttcagagtggagattctagtcattctactgcaacccctaaatccaggtttgatcaatta
gaagggatgttctggaagtcccaacagttggacttgttcccaggtttggatcatcaagaa
actttggagcttaatatagatgacattgaaattgatgaacctctacatgtagcatctact
tcaacatcccatgatgttgataataaaaagagagaaggggactcagaaagggatagatta
tttcaaggtgggactggtgatacaaagcccagagttaggactgctgaagaaattaaagct
aaatatagaaaaactgaggatgcttcttcggtggcttctgaagcaaggaataagctcatg
gagcgggggcaaaaacttgagaaactcagcaggcgcactgaagatctacagaatggagct
gaagattttgcatcaatgacgaaggagctagtcaagacactagaagcacgaaagtggtgg
catatttaa
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