KEGG   Fragaria vesca (woodland strawberry): 101312195
Entry
101312195         CDS       T02666                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03020  RNA polymerase
fve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101312195
  09124 Replication and repair
   03420 Nucleotide excision repair
    101312195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fve03021]
    101312195
   03400 DNA repair and recombination proteins [BR:fve03400]
    101312195
Transcription machinery [BR:fve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101312195
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101312195
SSDB
Motif
Pfam: RNA_pol_Rpb4 COG6_N
Other DBs
NCBI-GeneID: 101312195
NCBI-ProteinID: XP_004288557
LinkDB
Position
LG1:20747162..20749061
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQVSQVFEKSLQ
YVKRFSRYKNADAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD
DEVIDKMLNDIAMIKKFD
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtccggcgaagaggaagagaacgccgccgagctcaaaatcggagacgagtttctcaag
gccaagtgtttgatgaactgcgaggtttctctgattcttgagcacaagttcgagcagctt
cagcagatgtctgatgatcccaggaaccaagtctcccaggtgtttgagaagtctctacag
tatgtgaagcgatttagccggtataagaatgctgatgctgtgaagcaagtgagagaaatc
ctcagtagatatcagttgactgagtttgagctttgtgtgcttgggaatctctgccctgaa
actgttgaggaggccattgctatggtaccatctataaaggcaaaaggacgggtgcatgat
gatgaggtgattgacaaaatgttgaatgacattgcaatgatcaagaaatttgattag

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