Fragaria vesca (woodland strawberry): 101312203
Help
Entry
101312203 CDS
T02666
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101312203
03036 Chromosome and associated proteins [BR:
fve03036
]
101312203
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101312203
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Helicases
101312203
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101312203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
SsgA
CMS1
FlpD
Motif
Other DBs
NCBI-GeneID:
101312203
NCBI-ProteinID:
XP_004308148
LinkDB
All DBs
Position
LG7:complement(23188015..23193011)
Genome browser
AA seq
680 aa
AA seq
DB search
MPSIDVSDYVLEAPKKEKKMKKSKKELAVTDSPISSSKKESKLKKRKAVDMDDEEDRSET
SSELGDPVNHTKPNGDSAVEKSKKKSKKAKVEEAEEEEKVVVKADDPNAVTKFRISAPLR
AKLKEKGIEALFSIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGSAKEFRK
TGYGRAPTVIVLLPTRELAKQVFADFEFYGGAVGITACCVYGGSPYATQEYKLKRGVDVI
VGTPGRIKDHIERGNIDLSTLKFRILDEADEMLRMGFVDDVEQILGKVKDVTKVQTLLFS
ATLPSWVQNISKRFLKSDKKTVDLVGNEKMKASINVRHIVLPCSSSARVDVIPDIIRCYS
SGGRTIIFTETKDCASELSERLQGARPLHGDIQQGQREVTLAGFRSGKFSTLVATNVAAR
GLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRKSNISKIERESGVKF
EHVSAPQPIDVAKAAGLSAAEMVTNVSDSVIPAFKSVAEELLKTSGLSAVDLLSKALAKA
AGYTDVKKRSLLSSMENHVTVLLEAGKPIYTASFAYSALRRFLPEEKVESVKGMALTTDG
KGAVFDVAAEDLDMFLRGADNAAGISIQVLDSLPSLQEKEARGGRFGNGGGRFGGRGGGR
GGGRNDRFGGGRGRGSYNRW
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccttccattgacgtctccgattacgtgctggaggctccgaagaaggagaagaagatg
aaaaagtcgaaaaaggagctggccgtaaccgactctccgattagtagtagcaagaaggag
tcaaagcttaagaagcggaaggctgttgatatggacgatgaggaagacaggagcgagacc
agctccgagctcggcgaccccgtcaatcacaccaagcccaacggcgattcggcggtggag
aagagcaagaagaaatccaagaaggccaaggtggaggaggctgaggaggaggagaaggtt
gtggtgaaggcggacgatccgaatgcggtgaccaagtttcggatttcggctccgttgagg
gctaagctgaaggagaaggggattgaagccttgttttccattcaggccatgacgttcgat
accatcttggacgggtcggaccttgtcggccgggctcgcaccggtcagggtaaaactctg
gcgtttgtgctgccgatattggagtcgttaataaatggctctgctaaggaatttagaaag
accggatacggcagagccccgactgttattgtgctcttacccactagggagctggccaag
caggtgtttgcggacttcgagttttatggtggggctgtggggataacagcctgctgtgtg
tatggtggatctccgtacgcgactcaggaatataagttgaagagaggggttgatgtcatt
gtgggaactcctggtcgtatcaaggatcatattgagaggggaaatatagacttgagcact
ttgaagtttcggatacttgatgaagctgatgaaatgctgaggatgggttttgttgacgat
gttgaacaaattctaggcaaggtcaaagatgttactaaagttcaaacgcttctgttcagc
gcaaccttgccctcttgggtgcaaaatatttccaaaaggtttcttaaatcagataagaaa
actgtagatctagttggtaatgaaaagatgaaggccagcatcaatgttaggcatatagtt
cttccctgctctagttcagctagagtagacgtcattcctgacatcattcgatgttatagc
agtggaggccgcactattattttcactgagacaaaggattgtgcatctgagctttctgag
aggttgcagggagcaagacctttgcatggggacatacagcaaggtcagcgggaggtcaca
cttgcaggcttcaggtctggcaaattctcaacattagtagccacaaatgtggcagctcgt
ggactggatatcaatgatgttcaattaattattcagtgtgaacctccacgtgatgtagaa
gactatatccatcgatctggacgcactgggagagcaggtaatagtggagttgctgtaatg
ctttatgaccccagaaagtcaaacatatctaagatcgaaagagaatctggggtgaaattt
gagcatgtgtctgctcctcagccaattgatgttgccaaagctgcaggtcttagtgcagca
gaaatggttactaatgtctctgatagtgtaattcctgcattcaagagtgttgctgaggag
cttctaaaaacctcaggcctatctgcagtagatctactgtcaaaggctcttgctaaggct
gcgggctacaccgatgtaaagaagaggtcacttctgagttctatggagaaccatgtcaca
gtattgctggaggctggaaaacccatttacacagcatcctttgcttattcggccttgagg
aggttcttgccggaggagaaggtcgagtcagttaagggtatggcgctaacaactgatgga
aagggtgcagtgtttgatgtcgctgctgaagatttggatatgtttctgaggggtgcggat
aatgcagccggtatcagtatacaggtcctggactctttgccgagtttacaagaaaaagaa
gcaaggggaggacgatttggcaatggtggtggtaggtttggtggaaggggtggtggcagg
ggtggtggaaggaatgataggtttggcggcgggagaggccgtggcagctacaacagatgg
tga
DBGET
integrated database retrieval system
