Fragaria vesca (woodland strawberry): 101312274
Help
Entry
101312274 CDS
T02666
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101312274
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101312274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
101312274
NCBI-ProteinID:
XP_004304829
LinkDB
All DBs
Position
LG6:2120726..2131350
Genome browser
AA seq
1155 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDAMEGVVYSTSQFGLDERFGDGDTSQIGLDFDEDL
FLGQAAAQGNDAISGRDPQALTPPATPLEKHEVFEGVPGTSETVQMNETGNQNEVLAANT
EFVTYAQAPSTPGLFEEPNLSSVQEAMACNDHLDLEDHGLSNLPVPEGTENACSELGPRC
EDNNNTINVPENGYNVGDLEMKPPVHEQIKPVSPALECSNGTVGALDFPNRVEDINCGIV
INSEATMLTEKKGEQCVEPAGVRLDETVASPSCSQVTSELEESARKISSSGTCVQVPEDY
MEDQQTSLKSEIQNDIANYTGEACTPNIVDCFNPVAHEKMASTQFCVLQACNSDPSHHSV
VSSSDKSAEIPCNLSSEVVRLNSVANVISGDNQLDVLDRSATSDSLAPEKFLSISEGLTA
EPSGIPVESTPEKEVFGGDSGDGARSKLISGKKRSSTESSVTVQSLNSVESFGEARGKRT
ADSIPDDDDLLSSILVGRRSSVLKLKPTPPVPEMKTTKRLRTAVRSTASKRKVLMDDSMV
LHGDTIRQQLTNTEDIRRVRKKAPCTRPEISMIQRQNLEDEIFTEPIITGLAAELIFLHT
ENFDVSTTRFSEDDQGNTSDKVLKDEQYFVRSNVTEETEILGSTKPVIVRDDAEAQADIV
IETENRGMQDHNLRSQDSDAQGQRITNPEESKHEPLVEMSEMEIDVNNAEATNFVPADTY
DMPSEDNIQPRHMNKIDGEDASLQTGTLCMSPDEKVDGQPIDVDALVVDASIQKGVDAIG
FAEHNVEISADVQTGFSEVTDLNATLATVTLETGDHKNLSLDDQPMEEMGHELHIVNENE
VLDATYGCDDKDTKSSCMLGGEDNIGSTISLELDVDAKYNSFSDKENLEHEEADPRSGTE
AKVTADYPAGNRGDYGDVVFGNDTEFLNVDDEEIAEEADDMPSAEDTCLLENSGWSSRTR
AVAKYLQTLFDQEAVHGKKVLGMDNLLNGKTRKEASRMFFETLVLKTRDYINVEQAKPFD
NINIKPRVKLMKSDF
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgttttactcgcagtttatattggcaaaaaaaggcccacttgggacgatatggatagcg
gcacatttggagcgcaagcttcgcaagaatcaggttgccgacaccgatattggcgtctct
gtagattctattctttttcctgaagttccgattgctctccggttgtccagtcatcttctg
cttggtgttgtgaggatatattctagaaaggtgaattacctttttgatgactgcagtgag
gctttgcttaagattaagcaagcttttcgctccaccgcagttgatttaccaccagaagaa
tcaactgcaccgtatcattctatcaccttgcctgagacttttgatcttgatgattttgag
ctaccagataatgaaatttttcagggtaattatgttgatcatcatgtcagtacaagggag
cagattactctccaagatgcaatggagggtgtggtttactcgacatctcagttcggattg
gatgagcgatttggggatggtgatacttctcaaattggtctagattttgatgaggacttg
ttcttaggccaggctgcagctcaagggaatgatgcaatttccggtagagatcctcaggca
ttgactccgccagcaacacccctggaaaagcatgaagtttttgagggagtacctggaact
tcagaaactgtgcaaatgaatgagactggaaaccagaatgaagtccttgctgcaaatact
gaatttgtcacatatgctcaggctccgtcgactcccggattatttgaagagccaaacttg
tctagtgttcaggaagctatggcctgcaatgatcacttggatttggaagaccatggttta
tcaaatttaccagtaccggaaggcacagaaaatgcttgtagcgagttaggtccacgttgc
gaggataataataatacaataaatgtgcctgagaatggatacaatgtgggagatctggag
atgaaaccaccagtgcatgagcagattaaacctgtatctccagcattagaatgttcaaat
gggacagttggtgcactggatttcccaaacagggtggaagatataaattgtggtattgta
attaacagtgaagcaactatgctcacagaaaaaaagggtgaacaatgtgtagaacctgca
ggagttaggctggatgaaaccgttgcatctcctagttgctctcaggttacctccgagttg
gaggagtctgctcgtaagatttcttcgagtggtacctgtgttcaagtgccagaggattac
atggaggatcaacaaacatctctaaagtctgaaattcaaaatgatattgctaactataca
ggagaagcatgcacacctaacattgtagattgtttcaaccctgttgctcatgaaaaaatg
gcatctactcaattctgtgtgcttcaggcatgcaactctgatccgagtcatcacagtgtg
gtatcttcttcagataaaagtgcagaaattccttgcaacttatcttctgaggttgtgcgg
ttaaactcagtggccaacgttatatctggcgacaatcaactggatgttttggataggtct
gccacttctgactcgcttgctcctgaaaagtttctatctatatcagaggggctcactgct
gaaccaagcggtataccagttgagtctacacctgaaaaagaagtcttcggtggtgatagt
ggtgatggtgctaggtccaaactcatctctgggaagaaacgcagttctactgaaagtagt
gtaacagttcagagtttaaattcagtcgagtcatttggggaggcccgaggaaagcgaact
gcagattccatccctgatgatgatgatttattgtcttctattttagtcgggagaagatct
tcagttttaaaactaaaacctactccgcctgtacctgaaatgaaaaccacaaaacgcctc
cgaactgctgtccgtagcactgcttcaaagagaaaagtgctaatggatgattcaatggtc
ctgcatggcgatacaatacgccagcagttgacaaataccgaagatatacgtcgtgtgcgg
aaaaaagccccttgtactcgcccagaaatttcaatgattcagagacaaaatttggaagat
gaaattttcactgaacccatcatcacaggcttggcagcggaactgatatttctgcacacc
gagaattttgatgtgagtacaaccaggttttctgaagatgatcaaggcaacacttctgac
aaggtactgaaggatgaacaatattttgtgaggtcaaatgttactgaagaaactgaaatc
cttggaagcaccaaacctgtaatagtgagagatgatgcagaagcacaagctgacattgtt
attgagactgaaaaccgggggatgcaagatcataacctaagatctcaggactctgatgct
caagggcagaggattaccaaccctgaagaatcaaagcatgaacccttggtggagatgagc
gaaatggaaattgatgtaaacaatgcagaagctaccaattttgttccagcagatacatac
gatatgccatctgaagataacatccagccaaggcacatgaataaaattgatggggaagat
gcttctctgcagacgggtacattatgcatgtccccagatgaaaaggtggatggtcaacct
attgatgtggatgcgttggtagtcgatgcaagtattcagaaaggagttgacgctattgga
tttgctgagcataatgtcgaaatcagtgcagatgttcagacgggtttttctgaagttact
gacctaaatgctacacttgcaaccgtaactcttgaaactggtgaccacaagaacttgagt
ttagatgatcaacctatggaagaaatgggacatgagctgcatattgtgaatgaaaatgag
gtcctagatgcaacgtatggttgtgatgacaaggacactaagtctagttgtatgcttggt
ggagaagacaacattggttctacaatttcgttggaacttgatgtggacgcaaaatataat
tccttcagtgataaagaaaacctagaacatgaggaggctgatccacgcagtggaactgag
gcaaaagttactgcagactaccctgctggaaatcgtggagattatggtgatgtagttttt
ggaaacgatacagaatttttgaacgtagatgatgaagagatagccgaggaggcggatgat
atgccttctgctgaagacacttgtcttcttgaaaacagtggatggtcttcccgcaccagg
gctgttgccaagtatcttcaaactttatttgatcaggaagctgtgcatgggaaaaaggtt
cttggcatggacaacttattaaatggaaaaactcgtaaggaagcttcaaggatgttcttt
gaaacattggttcttaagacgagggattacatcaacgtagaacaagcaaaaccatttgac
aacattaacataaagcctagagtaaagctcatgaaatcagacttctga
DBGET
integrated database retrieval system
