Fragaria vesca (woodland strawberry): 101312278
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Entry
101312278 CDS
T02666
Name
(RefSeq) vacuolar amino acid transporter 1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101312278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101312278
Transporters [BR:
fve02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
101312278
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Paralog
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Motif
Pfam:
Aa_trans
Trp_Tyr_perm
DUF8641
Motif
Other DBs
NCBI-GeneID:
101312278
NCBI-ProteinID:
XP_011467312
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Position
LG6:22821255..22826231
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AA seq
532 aa
AA seq
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MAQQKETDPILFVSDDELSDDIEGNKIESGSISSSSSGSHPSPGNSFSSQTWPQSYRETL
DSYTIAASPNFGNLGFTPGGSNFSSFDIRSNVDMGASKAPLLSADERERFSQNWDRSSRA
QSVWSQRSALNKQVTGEFPVAHGCSLTQTVFNGINVMAGVGLLSTPYTVKEAGWASILVL
LLFACVCCYTAILMRICFETNKGIKSYPDLGEAAFGRYGRIFISIILYAELYSYCVEFII
LEGDNLSRLFPGTSLNWAGFHLDSLHFFGIVTALVVLPTVWLKDLRLISFLSAGGVIVTL
LIVLCVILLGTTGGIGFHQTAQVVNFNGIPLVIGVYGFCFAGHTVFPNIYQSMADKKQFS
KALIICFLLSVLLYGSIAVMGFLMFGQSTLSQITLNMPPHAIVSKVALWTTVINPLSKYA
LLMNPLARSIEELLPVGLSNSFWCFILLRTALVISTVGAAFLIPFFGLVMALIGSLLSVL
VSVIVPALCFLRIAGMKASRIQVVSSITVAAFGVVAAILGTYSSVSKIVKSY
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagaaagaaacggatccgattttgttcgtgagtgatgacgaactgagcgat
gatattgaggggaacaagatcgagagtggcagcatcagcagcagcagctccggtagtcat
ccctcacccggaaatagtttttcgtctcagacatggccccagagctacagggagactctg
gattcttacactattgcagcatcaccaaatttcggcaatctcggatttactccgggcggt
agcaacttttcgagcttcgatattcggagtaatgttgatatgggagcttcaaaagccccc
ttattgtccgccgacgaacgtgaacggttttctcagaattgggacaggagctccagagcg
caatccgtatggtcacaaaggtcggcactgaataagcaggtcactggagaatttcctgtt
gcgcatggatgtagcttgactcaaactgtattcaatggaattaatgtaatggccggagtt
gggcttctgtctacaccttatacagtgaaagaagctggctgggcaagcattctggtgtta
cttctttttgcatgtgtgtgttgttacacagccatactcatgagaatctgctttgagacc
aataaaggaattaaaagttacccagatttaggagaagctgcattcggaagatatggccgt
attttcatatctatcattttgtatgcagaactctattcttactgtgtagaattcataatt
ttagaaggagataatctcagtaggctattcccagggacatccttgaattgggctggtttt
cacttggactccttgcacttctttggaatcgtaaccgccttggttgttctaccaacggtt
tggttgaaagatcttcgtttaatttcattcctctcagctggtggggtcattgttacactt
ttgatcgttctatgtgtaattttactcggtacaactggtgggattggatttcatcaaact
gctcaagtagtgaattttaatggaattccacttgtaattggtgtatatgggttttgcttt
gccgggcatacagtgtttccaaatatttaccaatccatggctgacaaaaaacaatttagc
aaggctctgatcatatgctttctgttgtccgttctgttatatggcagtattgctgtcatg
ggatttctcatgtttggtcaaagcacgttgtctcagataactttaaatatgccaccgcat
gcaattgtttccaaagttgcactgtggacaactgttatcaacccgttgagtaaatatgcc
ctcttgatgaacccattagcaaggagtatagaggagcttctgcctgttggactttctaat
agtttttggtgcttcattcttttgagaacagcacttgtcatctctactgttggtgctgct
tttcttattcctttctttggtcttgtgatggctttaataggctctctactcagcgtactc
gtgtccgtgatagtgccagcactatgcttcctgagaatagctggaatgaaagcttcaagg
atacaggttgtttcaagtatcacagtagctgcatttggagtagttgctgcaatccttggt
acctattcttcagtctcaaaaatcgtgaagagttattga
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