KEGG   Fragaria vesca (woodland strawberry): 101312289
Entry
101312289         CDS       T02666                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101312289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fve03021]
    101312289
Enzymes [BR:fve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101312289
Transcription machinery [BR:fve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     101312289
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 101312289
NCBI-ProteinID: XP_004288915
LinkDB
Position
LG1:complement(5353504..5359826)
AA seq 1201 aa
MGASPDANGDIGMSSKGKGFYNGNFDDMDIDDLDFGDEEVEDSTTLHDLGEVFLDEFCKE
ASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDPSKKGNADWRFAAIKF
GKVTLSKPCFWGGSDSDKEYNMLPRHARLQNMTYSARMSVNITVQVYTQNLVESDKFKTG
TEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKGDCEFDQGGYFIINGAEKTFIA
QEQSCLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISKLENVEGVEKVLSVYFMSTEIP
VWIWFFALGVSSDKEVIDLIDYGIEDASISNILFASIRDADERKDDFRRGNNALRYVENA
IKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVKCLLQTSIGLRKCDNRDDFRNK
RLELAGELLERELKAHVSHARRKMAKALQRDLGGDHVVRPVEHYLDASIVTNGVSRAFST
GAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTRQQVQYTGKAGDARYPHPSHWGKVC
FLSTPDGENCGLVKNLATTALVSINISEPILPKLFKCGIEELVDDTYTSLAGKHKVFLNG
DWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHKGEVRIFSDAGRILRPLLVVQGLK
KIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKYLFMEEQGSVVKYTHCELDMS
FLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTNPNLRVDTLSHNLHYPQRPLFR
TMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHLGYNQEDSIVMNRASLERGMFR
SEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKFGRVDNLDDDGFPCVGASLQSGDII
IGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAVVSLRQVRSPSLGDKFSSMHGQ
KGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATP
FSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFMGPTFYQRLIHMSEDKVKFR
NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSLMNVCQKC
QNAANVIERKLTGGRKIRGPYCRVCDSADDIVRVNVPYGAKLLCQELFSMGISLKFETRL
C
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgggagcttctccggatgccaacggagatataggtatgagtagcaagggaaaaggcttt
tacaatgggaattttgatgacatggatattgatgacctggattttggtgatgaagaagtt
gaggattcgactaccttacatgatctgggagaagtgttcctggacgaattctgtaaggag
gcgtcagtgtcattcttcaaggagtatggcctcctaagtcatcagattaattcatacaat
gactttgttgagaatggcatacaaagggtctttgattctttcggtgagattgtagttgag
cctaattttgatccatcaaagaagggaaatgctgactggcgatttgcagctatcaagttt
ggaaaagtcacccttagtaagccatgtttttggggaggttcagatagtgacaaggagtat
aacatgttaccaaggcacgctaggcttcagaacatgacgtactcagccaggatgtctgtc
aatattactgtccaggtatatactcaaaatcttgtcgaaagtgacaagtttaaaactgga
acagagcaactactggaaaagacgactctgagtactgacagcagggacatcataattggt
aggattcctgtaatggtgaagtctaacttgtgttggatgaagggagtcgagaaaggggac
tgtgagtttgaccaaggaggctactttataataaatggtgcagagaagacattcatagct
caagaacagagctgcttgaagaggcttctgattacaaatagtcagggtctcacagtagca
tataggtcagaggtcaagcgacataggctcataattagactatccgggatttcgaagctt
gaaaatgttgaaggagtggagaaagtcctgtcagtatattttatgtcaacagaaattcct
gtttggatttggttttttgcccttggggttagttcagacaaagaagttattgatctgatt
gattatggcattgaagatgcaagcatttcaaacatactgtttgcctcaatccgtgatgca
gatgagcgaaaagatgactttcgtagggggaataatgctctgagatatgttgaaaatgca
ataaagagtacgacatttccacctggggaaagcgtggaagactgcatcagcatgtatctg
tttcctaatatgagaggcttgaagcagaaggctcgctttctagggtatatggtgaagtgt
cttttacagacctccattggcctaagaaaatgcgataatagggatgactttagaaacaag
agattggagttagcaggtgagcttctagaacgagagctgaaggcacacgtttcacatgca
cggaggaaaatggcaaaggctctgcaaagagacctaggcggtgatcatgttgtccggcca
gtggaacactatctagatgcttccatagttaccaatggtgtttcccgagcattctctact
ggagcatggtgtcatcctttcaagaggatggagaggatatcaggtgtggtggcaaatatt
gggcgagcaaatcccttgcagacaatgattgatatgaggaagacacgccagcaagttcaa
tacactggcaaggctggagatgccagatatccgcatccttctcactgggggaaggtttgc
tttctttcaaccccggatggtgagaactgtggacttgtgaaaaatttggctaccactgcg
cttgtaagtataaacatatcggagcccatattgcccaaattgttcaaatgcggcatagag
gagttggtagatgatacctatacttcactggctgggaagcataaagtttttctgaatggt
gactgggttggcatttgtgtagactcacatggttttgtaacaaaactaaggaggttgcga
cgcagtaaaaagttaccacatcaggtggaaatcaaaagagacgaacacaaaggagaagtg
cgcatattttctgatgctggaaggattctacgtccgctcttggttgttcagggtttgaaa
aagattaaagcagcaaaaggagaaaagcataccttccaagattttctcgacaagggaata
attgagttcattggtgcagaagaagaagaggactgccgtacagcatgggccattaaatat
ctatttatggaagaacagggctcggtggtcaagtacacacactgtgaactggacatgtcc
tttttgttaggtttgagctgtggtataattccctttgcaaatcatgatcatgcaaggagg
gtgctctaccagtctcagaagcactctcagcaggctattggttattctactacaaatccg
aacctcagagtggatacgttgtcccacaacttgcactacccccaacggccgctttttcgt
acaatgatagctgattcccttggaaaaccaggatacccagtgggacataacggttttatg
ccaaagcctgagtacttcaatggtcagaatgcaattgttgcagtcaatgtgcaccttggt
tataaccaagaagattctatagtaatgaaccgggcatcactggaacgtggtatgtttcgt
tctgagcacatcaggagttacaaggctgaggttgaaaacaagctctcattggaaaaaaga
cgaaaaccagatgagtgtgtcaactttggcaaaatccagagtaaatttggacgtgttgac
aaccttgatgacgatgggtttccttgtgttggtgcaagtctccagagtggagatatcatt
atcgggaggtgtagtgaatctggtaccgatcatagcatcaaattaaagcatactgaaagg
ggcatggttcagaaggttgtgctttcctctaatgatgctggcaagaactttgcggttgta
tcattaagacaggtacgttctccttctcttggagacaaattctctagcatgcacgggcag
aagggggtcctcggttttttggagtatcaggagaacttccctttcacaatacaagggata
gttccagatattgtaattaatccacatgcattcccttcaagacaaactccgggtcaactc
ctagaggctgctttagggaaggggattgcctgtggtggttcaaagagatatgccacaccc
ttctccactctctctgttgatgacatcacagaccagcttcatagagctggattttcaaga
tggggaaatgagagagtgtacaatggcagaactggtgaaatggttcgccagctgattttt
atgggcccaacattctatcaacggctgattcacatgtctgaagataaagttaagtttagg
aacactgggccagtccaccctctcacccggcagccagtggcagacaggaagcgatttggt
gggatcaagtttggtgagatggagcgcgactgcctgatagcccatggagcatcagcaaac
ttgcatgaacgcctctttactctcagtgactcctccctgatgaacgtttgccagaaatgc
cagaatgctgctaatgtgatagagcggaaattgactggcggccgcaaaatcaggggtcca
tattgccgggtctgcgactctgctgatgacattgtgagggtgaatgtgccatatggggcc
aagctattgtgccaggagctattcagcatggggataagtctcaagtttgaaaccaggctt
tgttga

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