Fragaria vesca (woodland strawberry): 101312489
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Entry
101312489 CDS
T02666
Name
(RefSeq) uncharacterized LOC101312489
KO
K15082
DNA repair protein RAD7
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101312489
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
101312489
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Ortholog
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GFIT
Motif
Pfam:
LRR_4
LRR_At1g61320_AtMIF1
LRR_NXF1-5
SAM_Ste50p
LRR_6
RRXRR
Motif
Other DBs
NCBI-GeneID:
101312489
NCBI-ProteinID:
XP_004288980
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Position
LG1:6728686..6732787
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AA seq
903 aa
AA seq
DB search
MTVLRSREIAPPKTTSHPPKTRPKSDPPTPAVTTPTTTTTTTPAVNSTSSSISQNPNPNS
NPNPKPSDSGSIRRRSLRLASKTPDSAAERNTQIGEVVVDLFGERVTAMGDEKGAEDLKL
GSGSDSVTRLSGKGSGFGDEEKGLSELGLGGDLGVSGDNGKEEEKKRKLDIDINLPAAEC
EEEDGGSRSFLSLRSGKRVAKRGGDGGGGGGGNGEWGSDLSAEKSGGVKGKGKWGEISVI
DVVVLDSDEEDERVIDVVVLDSDSNVLQSDVPSGGSSEGKGKRNLSDVVEDSEDGMSSGE
NGGGRRKFSRQEKGKEKLIGGALLPNDFDKVELDFLGIGALSELSSMPNVVLSELSLMPN
VVLSELSLMSNVVPSPAQVGENVAMQEQVQARNTNAREEGRDRNQYMERFRDIARQNASR
FARFDPREEEENDMPPQVDVELEDEDWPGPFSTAMRIMRDGAEKNMQEHSASKDKTKPAL
VKWVPKRQEQDLAISKNLIPSLQELCLSVLAKNADEIVSLESVPDALRHQLSHLLCDSRR
MNTHFFELLVQGSPTEVRLRDCSWLTEEEFTKSFQLCDITNLTVLQLDQCGRCLPDYILN
STLARSANCLPSLVSLSLSGACRLSDVGLGALVSSVPALRSLNLSQCSLLTSSSIDTLAN
SLGSLLKELYLNDCQSIDAMQILPALKKFEHLEVLWLPGIENVCDDFIKEFISARGHNLK
ELSLTDCINLTDSSVKVLAETCSGLCALDLFNLHKLTDYSLGYLANGCRAIQTLKFCRNS
FSDEAVAAFLETSGECLKELSLNNITKVGDNTAISLARHSRNLHCLDLSWCRNLTDEALG
LIVDSCLSLKMLKLFGCTQITDLFLSGHSNPDVKIIGVRMTPILKDVRVPDPAAGPLHYS
AVF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacggtccttagatcgcgtgagatcgccccgcccaaaacgacgtcgcatccccccaaa
acgcggcccaaatcagacccacccaccccagccgttactactcctactactactactact
accaccccagccgttaattccacatcctcctccatatcccaaaaccctaaccctaattcc
aatcccaatcccaagcccagcgattccggctcaatacggcggcggagtctccgtctcgct
tcgaaaacccccgattccgccgcagagaggaatacccaaatcggcgaagtggttgttgat
ttgttcggagagagggttacggctatgggagatgagaaaggggctgaggacttgaaattg
ggttctgggtcggactctgtgacccgattgagtgggaaaggttcgggctttggggatgag
gagaagggtttgagtgaattagggcttggtggtgatttgggggtttctggggataatggt
aaggaggaagagaagaagaggaagctggacattgatatcaatttgccggctgcggaatgt
gaggaggaagatggagggagtaggagctttttgagcttgcgatcggggaagagagttgcg
aagagaggaggggatggtggtggtggtggtggtggtaatggggagtgggggagtgatttg
agtgctgagaagagtggtggtgtgaaagggaaggggaagtggggtgagattagtgttatt
gatgtggtggtgttggattcggatgaggaagatgagagggttattgatgtggtggtgttg
gattcggattcgaatgtgttgcagagtgatgttccaagtggggggagctctgaggggaaa
gggaagaggaacttgagtgatgtagttgaggattcggaggatgggatgagttccggtgag
aatggtgggggtagaaggaagtttagcagacaagaaaaagggaaggagaagttgattgga
ggagctttgttaccgaatgattttgacaaagtggaattggatttcttgggaataggagca
ttgagtgagttgagttcgatgcccaatgtggtgttgagtgagttgagtttgatgcccaat
gtggtgttgagtgaattgagtttgatgtccaatgtggttccgagtcctgctcaggtaggg
gagaatgtagcaatgcaagagcaggtgcaggcgaggaacactaatgcaagagaggaggga
agagacaggaatcaatacatggaacggtttcgggacatagccaggcaaaatgcttctcgc
tttgctcgtttcgatcctcgagaggaagaggagaatgatatgcctcctcaggttgatgtg
gagctagaggatgaagattggcctggtccattttctactgcgatgaggattatgagagat
ggagcagaaaagaatatgcaagagcacagtgcatctaaagacaagaccaaaccagcattg
gtgaagtgggttcccaagcgtcaggaacaggatcttgcaatatcaaagaatttgatcccc
tcattgcaggagttgtgtttgtctgttcttgctaagaatgccgatgaaatagtttcactt
gagagtgttccagatgctttgaggcaccagctcagtcatctgctctgtgattctagaaga
atgaatactcattttttcgaacttcttgttcaaggatcgccaacagaggttcgcttaagg
gattgctcatggttgacagaggaagagttcacaaaatcttttcagctctgcgacattacc
aacttaacagtactacaacttgaccaatgtgggcgctgtctgccagattatatattgaat
tctaccttagctcggtcagccaattgcttgccctctttagtttctttatccctcagtggt
gcatgtcgtctttcagatgttgggttaggtgcacttgtctcttctgtccctgcactaaga
tctctgaatctcagccagtgttcccttctcacttcctcaagtatcgacactttagctaac
tcattgggatcattgctgaaggaactatatttaaatgattgccaaagcattgatgctatg
cagattctacctgccttaaagaagtttgaacatttggaggtattgtggctgcccggcatt
gaaaatgtttgtgatgattttattaaggagtttatttctgctcgtggccacaatttgaag
gagcttagtttgactgattgcataaatttaacagattcatctgtgaaagtcttagctgaa
acgtgttctgggttatgtgcgcttgacctatttaacttgcataagctgacagattattct
ttaggatatcttgcaaatggctgccgagcaattcaaacattaaaattttgtcgcaattca
ttcagtgatgaagctgttgctgcattcctggaaacttctggagagtgtttgaaagaactt
tcactaaataatatcacgaaggttggtgacaacacagccatatcacttgccagacattca
aggaacttacattgtctggatctatcttggtgccggaatttgacagatgaggccctgggt
ttgattgtggacagctgcctatctctgaagatgttaaaactgtttggatgcactcagatt
acagacttgttcctgtctggccactcaaatcctgacgtaaaaatcattggcgtgagaatg
actccaatattgaaagatgttagggtgcctgatcctgcagcaggtccattacattattca
gcagtcttctaa
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