Fragaria vesca (woodland strawberry): 101312551
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Entry
101312551 CDS
T02666
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101312551
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101312551
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101312551
NCBI-ProteinID:
XP_004302801
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Position
LG6:complement(9719915..9723245)
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AA seq
376 aa
AA seq
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MGNSHGHRKHRNGAKHPVTATPPFKYQSSDHPEAHNPSSSKPIMAVSLPYSHVDSSLRAL
AAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREACRKKEPLWIVFDISGTINLSSYLN
VSSHKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSKHIWIDR
CSLRDYEDGLIDITRCSTDITISRCHFSEHDKTMLIGADPSHVDDRCIRVTIHHCFFDGT
RQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKIAFKYLTEKAAD
KEAATTGFIKSEGDLFITGTKAGSSTEGGEDCTFHPSKHYQTWTVGPPVDDLKHVLQHCT
GWQSIPRPADQASVAS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactcccacggccaccgcaaacaccgtaacggcgcgaagcaccccgtaacggcc
accccaccctttaaatatcagtcctccgatcatcccgaagctcataaccccagctcaagt
aagcccatcatggctgtgtccttgccttactctcatgttgactcctcccttcgcgccctc
gctgcccaagctgaaggctttggccgcttagccattggcggcctccatggtcctctttac
cacgtcaccactctagcagatgatggtccagggtcacttagggaagcctgtcgaaagaaa
gagccactttggattgtgtttgatatttcgggcactatcaatctctcgtcttacttgaat
gtgtcgtcgcataagacaattgatggccggggtcagaggattaagtttacggggaagggg
ttgagactgaaggagtgtgagcatgtgatcatatgcaatttagagtttgaaggtggtaga
ggaccagatgttgatggcattcagataaaaccaaactctaagcacatatggatagaccgg
tgcagcctccgagattatgaagacggacttatagatatcaccagatgcagcacggatatt
acaatttcaaggtgtcatttctcggagcatgataagacaatgctaattggagcagacccc
tctcatgttgatgacagatgcatccgagttacaattcaccactgtttctttgatgggacc
cgacagcggcatcctcgagttagattcgccaaagtacatctatacaacaattacactcga
aactggggcatatatgctgtttgtgccagtgtagaatcacagatatactctcaatgcaat
atatatgaagcaggacagaagaaaatagcctttaaataccttacagagaaggcagcggac
aaggaggcagcaacaaccggcttcattaagtcggaaggggacttattcataactggaact
aaagcaggatcatccaccgagggtggtgaagattgcacgtttcatcctagcaagcactac
cagacatggacagtaggacctccagtcgatgatctgaaacatgttctccaacattgcacc
ggatggcagtccattcctcgaccagctgatcaggcaagtgttgcatcgtag
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