Fragaria vesca (woodland strawberry): 101312559
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Entry
101312559 CDS
T02666
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101312559
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101312559
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
DUF4523
Motif
Other DBs
NCBI-GeneID:
101312559
NCBI-ProteinID:
XP_004304288
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Position
LG6:31741333..31745501
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AA seq
470 aa
AA seq
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MSTSGTPQFRYTQTPSKVLHLRNLPWECAEEELVELCKHFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDADTASAARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGVVQPAVGPDGKKKEM
ESNVLLASIENMQYAVTVDVIHTVFSAFGTVQKIAIFEKNGQTQALVQYPDIATAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAVQSGYPAAPAAWQN
AQASPVYHGNEYSAAAAGPAEGPPGGPPGQVPSWDPNMQAGRPSFVSVPSTFPGQIYPTS
SGGPVYASAPMPPGSSPMHQPGAPPHMRPGGASPPGVRPPGASPSYYGQS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcggggacgccgcagttcaggtacacgcagacgccgtcgaaggtgctccac
ctccgcaatctcccttgggaatgcgccgaggaggagctcgtcgagctctgcaagcatttt
gggaagatcgtcaacaccaaatgcaacgtcggcgccaatcgcaaccaggccttcgtcgaa
ttcgcagacctaaaccaggccataaatatggtatcgtattatgcgtcgtcgtcagagccc
gctcaagttcgggggaaaacagtttacatccagtattccaatagacatgaaattgtgaac
aacaaaagccccggagatgttcctgggaatgtgttgctggttaccatcgagggtgttgaa
gctggtgatgtcagcattgatgtcattcacttggtgttttctgcttttgggtttgtgcac
aagattgctacttttgaaaaggctgccggcttccaggcattgattcagttcagtgatgct
gacactgcatctgcggcgaggaacgccttggatggaagaagtatacccaggtacttgctt
ccagagcatgtcggttcatgccatttgcgtatctcgtattctgcacacactgatctgaac
atcaagttccagtcacacagaagcagggattacacgaatccatacctacctgtaaatccc
actgcaattgagggagttgtacagcctgcagtaggtcctgatggaaagaagaaagagatg
gagagtaatgtgcttctggcttccattgaaaatatgcagtatgctgtgactgtggatgtt
attcacacggtattttcagcatttggcactgtacaaaaaattgctatattcgagaagaat
ggtcaaacacaggcattagttcaataccctgatattgctaccgcagccgttgccagagaa
gctctagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttatagtgacaaaagtagagattatacaatccca
gatgctagtttgcttgcggtgcaatctggctaccctgcagctcctgcagcttggcagaat
gctcaggcttcgccagtgtaccatggaaatgaatatagtgctgcagcagctggaccggct
gaaggtcctcctggaggtcctcccggacaagtgccatcatgggatccaaacatgcaagct
ggccgaccatcgtttgtttctgttcccagcacctttcctggtcagatatatcccacatca
tcaggtggcccggtatatgcctcagcaccaatgcctccgggctcatcaccaatgcatcag
ccaggtgctccaccgcatatgcgaccaggtggtgcgtcacccccaggtgttcgacctcct
ggtgcttcaccttcttattacggccaatcctga
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