Fragaria vesca (woodland strawberry): 101312561
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Entry
101312561 CDS
T02666
Name
(RefSeq) uncharacterized LOC101312561
KO
K17925
sorting nexin-13
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fve04990
]
101312561
Domain-containing proteins not elsewhere classified [BR:
fve04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101312561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
101312561
NCBI-ProteinID:
XP_004304511
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Position
LG6:complement(36021555..36027882)
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AA seq
1095 aa
AA seq
DB search
MSAQRQLVNVRDLVEEAKKRIVFLAVCVVGLSYLMSLTSSNVLVNLPAAASLIVILRYLS
LDYDMRRKTAAYNNRPPPANNAIQSKPVPLPNTVGRSEWRRKVNSPVVEDAIENFTRHLV
SEFVTDLWYSRLTPDKQGPEELVCIVNSVIGELSARLRNINLIDLLTRDLISLICSHLEL
FRITQAKIPKQQSGLLTIEKRDMELRLILDAENKLHPALFSAEAEHKVLQHLMDGLISFT
FKREDLQCTLFRYIVRELLACAVMRPVLNLASPRFINERIEQLVIKMNESKGITMVQEES
QSKQEESSMISSDHFSKYLDPSVTGVELVQLKNGQSRTSVDRPAAEKVNGSKDPLLSIDT
PSSRPWNSLRMNSQSINERVIERHNSGGEWGDMLDLISRRKTQALAPENFENMWAKGRDY
RKTEGENPIKEQVPKGPSGGKSIPGTDKEIVSKLNQVKVNNSFRPQGQNISNHSSVALDQ
EDDQHSPTRLVETDSGSSTSYTSEDEESDGATGLDSPGTKVWDGRSNRGMTVSHIHHPLE
NSGRHIAKKSRKGNMKFQRPRQKRSTPSNKKLHVWQEVERTSFLSGDGQDILKSPKGHAH
IEDSSDDSENESFGRINSGAATSSSAPSISLTSLKSSLAVDTFFKLKCEVLGANIVKSGS
KTFAVYSISVTDANNNSWSIKRRFRHFEELHRRLKEFPQYNLHLPPKHFLSSGLDLLVVQ
ERCKLLDKYIKELMQLPTISGSIEVWDFLSVDSQTYLFTNSFSIIETLSVGLDDKQSEKS
KRVLNFGEPVVDPSSLKREQIGIGIRDSTLQVKNNAVGDGQRLNAKGSSSVKNRGKDFGK
PLNTPSTCSGTGGPKQASSLINSGRTSKGRKEQESELFLDAATDPTLPTEWVPPNLSVPI
LDLVDVIFQLQDGGWIRRKAFWVAKQILQLGMGDAFDDWLIEKIQLLRKGSIVASGIKRV
EQILWPDGIFISKHPKRRPQPSTNLPQNSPQGQRPSEISSPRLDEQQQQDADRRAKFVYE
LMIDNAPAAIVSLVGTKEYDKCAKDLYYFLQSSVCLKQLAYDLIELLLSSAFPELEYVFK
EVHEEKHKFGEFKAQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcagaggcagctggttaatgtccgtgaccttgttgaggaagccaagaaacga
attgtcttcctcgccgtttgcgttgttggcttgtcatatctcatgtctttgacaagctcc
aatgttttggtcaacttgcctgctgctgcttccttgattgtaatccttcgctacttatct
ctggattatgacatgcgaagaaaaactgcagcgtacaacaatagaccaccccctgcaaat
aatgctatccaaagcaaaccagttccactgcctaacacggttggaaggtctgagtggaga
agaaaagttaattctcctgttgttgaggacgctatagaaaactttaccaggcatctagtt
tctgagtttgtgacagatctttggtattctcgtctaacaccagataaacaaggtccagag
gaacttgtgtgcattgtcaacagtgttattggggagctttcagcacgcttgaggaatata
aatcttattgatcttctcacaagggaccttatcagtctcatatgctctcacttggagctt
tttcgcataacacaagcaaagattccaaagcaacaatcaggattgctgacaattgaaaaa
cgagatatggaattaagactcatcttggatgctgaaaacaaattgcaccctgctctattt
tctgctgaagcggagcacaaggttttgcagcatctgatggatggccttatttctttcaca
ttcaagcgtgaagatctgcagtgcactttgttccgttatattgtcagagagcttcttgct
tgtgcagtaatgcgacctgtcctcaacttggctagtccaaggtttattaatgaaagaatt
gaacagttggttataaagatgaacgaatctaaaggtattaccatggtacaagaggaatct
cagtccaaacaagaggagtcgtcgatgatttcatccgatcacttctctaagtacttagac
ccttctgttaccggtgttgaactcgttcaattgaaaaatggacagtccagaacttcagta
gacagacctgcagcagaaaaggtgaatggatcaaaagacccattgctttcgattgatacc
ccatcttctcgtccatggaactcattgcgaatgaactcccaaagtatcaacgaaagagtc
atagaacggcataactcaggaggagaatggggagatatgttagatctgatatctcgcaga
aagactcaagcccttgctcctgaaaattttgaaaatatgtgggcaaaagggagagattac
agaaagacggaaggtgaaaatccgataaaggagcaagtaccaaagggtccctcaggaggg
aagtcgattccaggcacagataaggaaattgtatctaagctcaatcaggttaaggtgaac
aactctttccgcccacaaggtcaaaacatatcaaatcactcttcagttgctttggatcag
gaagacgatcaacacagtcctacgcggttggtggagactgactcaggaagcagtacttct
tatacttctgaagatgaagaaagcgacggtgcaacaggtcttgattctcctggaactaaa
gtttgggatggtagaagtaatagaggtatgactgtatctcacatccatcacccacttgaa
aattctggacgccatattgcaaaaaagtctcgtaaagggaatatgaaattccagaggcct
aggcagaaaagatccacaccaagcaacaagaagttgcacgtttggcaagaggttgagaga
acaagcttcttgtctggggatgggcaggacatactcaaatctccaaaaggacatgcccat
attgaagactccagtgatgattctgaaaatgaaagttttggtagaattaacagtggagca
gccacttcgtcatctgcaccatctatatctttaacttcgttgaaaagttcattggcagta
gatacttttttcaagttgaaatgtgaggtgttgggtgcaaatattgtgaagagtggctca
aaaacatttgctgtatattcgatatctgtgacggatgcaaataacaatagttggtcaatc
aaacgaagatttcgtcattttgaggagctacatcggcgtttaaaagagtttcctcagtat
aaccttcatttgccaccaaagcattttctgtcaagcggtttggatttacttgttgttcaa
gaaagatgtaaattgcttgacaaatacataaaggagctcatgcagcttccaacaatctca
gggtccattgaagtttgggactttttaagtgtcgattcccagacttatttatttacaaat
tcattttctataatcgaaacactgtcagttggcctagatgataagcaatctgaaaagagt
aaaagggttttgaatttcggtgaacctgtggttgacccatcttccttgaaaagggaacaa
attggcattggaattagggattctactttacaagtgaagaataatgctgttggagatggg
caaagattaaatgcaaaaggctcttcttctgtcaaaaatcgtggtaaagattttggaaag
ccactcaatactcctagcacatgttcaggcactggaggaccaaaacaggcatcttctctt
attaactcaggaaggacttcaaaagggagaaaggaacaggaatctgaattgtttcttgat
gctgctacagaccctacccttcctacagagtgggtgcctccaaatttaagtgttccgata
ttagatctggtagatgtcatttttcagctccaagatggtggatggatcaggcgtaaggct
ttttgggtggctaaacaaattctacaactagggatgggtgacgccttcgatgactggtta
attgagaaaattcagcttttgcgtaagggatcgattgttgcttctgggattaagcgagtt
gagcagatactctggcctgacggaatatttataagcaagcatccaaagcgaagaccgcag
ccatctacaaatttaccacagaattcacctcagggccagagaccttcagaaatatcatca
cctagacttgatgagcagcagcaacaggatgcagatcgacgtgcaaagtttgtttatgaa
ttaatgattgataatgcgccggctgctattgtcagtcttgttggtaccaaggagtatgac
aaatgtgccaaggatctctattactttcttcagtcatctgtttgcttaaagcaactggct
tatgaccttattgagctgctgctttcatctgcatttccagagttggaatatgtatttaag
gaggtgcatgaagaaaaacataaatttggtgagttcaaagcacaatag
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