Fragaria vesca (woodland strawberry): 101312615
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Entry
101312615 CDS
T02666
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101312615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101312615
03036 Chromosome and associated proteins [BR:
fve03036
]
101312615
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101312615
Coactivators
SAGA/TFTC/STAGA complex
101312615
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101312615
STAGA complex
101312615
TFTC complex
101312615
SAGA complex
101312615
SLIK complex
101312615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
101312615
NCBI-ProteinID:
XP_004294395
LinkDB
All DBs
Position
LG3:15551123..15556406
Genome browser
AA seq
538 aa
AA seq
DB search
MSNVPKEAIEVIAQSIGITNLSPDVALALTPDVEYRVREIMQEAIKCMRHSRRTILTTDD
VDGALKLRNVEPIYGFASGDPLRFKRAAGHRDLFYIDDKDVEFKDVIEAPLPKAPFDVSV
AAHWLAIEGVQPAIPENAPVEALAVYSDVKKSEYKEDGLPVDVKLPVKHVLSKELQLYFE
KITGLTQRSSSTLFKEALMSLATDSGLHPLVPYFTCFVADEVTRNLNNFLYLFALMRLVR
SLLQNPHIHVEPYLHQLMPSVITCLVAKRLGNRYTDNHWELRNFTANLVSSICKRFGHVY
HNLQPRLTRTLLHAFLDPNKALPQHYGAIQGLAALGPNVVRLLILPNLDSYMQLLEPEMI
LEKQKNEIKRHEAWRVYGALLRAAGQCMHDRLKKFHSLLSPAHLVWKRNGKIATTMTNKR
KASTDNLMLQPPLKKLAHDGMVGALPMNSMQVDMQGAAGGFTASAGSLNVGVSSMSHQLP
MEQMSGRDVSGQMVKGSTGLAQAWKEETDVGHVVASLFEHFGESVFPFTPKSELSFFL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtgcctaaagaagcgattgaggtcatagcacagagcattggcattaccaat
ttgtctcctgatgttgctcttgctctcacccctgatgtcgagtaccgcgttcgcgagatc
atgcaggaggccatcaaatgtatgaggcactcgcgacggactattcttacaaccgatgat
gtggatggcgcacttaaattgagaaatgtggagccaatttatggctttgcttctggagat
cctttgaggttcaagagagctgctggacatagggatttgttctacatagatgacaaggat
gttgaattcaaagatgtgattgaggcacctttgccaaaagcaccatttgatgtatcagtt
gctgctcactggctggcaatcgaaggtgttcaacctgcaattccagaaaatgctccagtt
gaagcacttgctgtatactctgatgtcaaaaaatctgaatacaaggaagatggacttcct
gtagacgttaaattacccgttaagcatgtactatcaaaggaacttcagctttactttgag
aagattacagggcttactcaaaggtctagctcaacccttttcaaagaagcattaatgagt
ttggcaacagattcaggactccatccgttggtcccttactttacgtgtttcgttgctgat
gaggttacacggaatttgaataattttctctacctatttgctttgatgcgtcttgtccgg
agccttcttcaaaatcctcacatacatgttgaaccttatctacaccaattgatgccttct
gttattacctgccttgttgcaaaaagactagggaatagatatactgacaatcactgggaa
cttagaaactttactgccaacctggtttcttcaatttgcaaaagatttggacatgtttat
cataatcttcagccacggttgacaaggactttgcttcatgctttcttggacccaaacaaa
gcattaccccaacattatggcgcaattcaagggctagcagctcttggtcccaatgtggtt
cgtttacttatactgccaaatcttgattcatatatgcaacttcttgagccagaaatgata
cttgagaagcaaaagaatgagataaagaggcatgaagcttggcgcgtctatggggccttg
ctgcgtgcggctggccaatgcatgcatgaccggctcaagaagttccacagtctgctctct
ccagctcatcttgtttggaagaggaatggaaagattgcaacaacaatgacaaataaacgc
aaagcaagcaccgacaacttgatgctgcaaccaccactcaaaaaattagctcatgatggc
atggttggagcattaccaatgaactccatgcaagttgacatgcaaggggctgcaggcgga
tttaccgcatctgctgggagcttgaatgttggcgtttcatcgatgtcccaccagttacca
atggaacaaatgtcaggaagggatgtcagtggccaaatggtaaaggggtctactggtctt
gctcaggcatggaaagaagagaccgatgttggacatgtggttgcatcattgtttgaacat
tttggtgaaagtgtatttccctttactcccaaatcagagttatcttttttcttgtga
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